Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00310 ATGGATGCGCGTAGAGCTCCACGCGCCGTTATTGATCCTAAGGTCCGCAGAGTCGGGTTCTTCGCCCCGCCCGACCGCTCTCAATCGGGTCCACCACACCTGATCTCACTTGACGTCTCTCCCGCAGCCAACTCCCTCTCGCCGGTCATGATCCCACCGCCGCGCCATTCGTCGGAGAATCTCAGCCTCCACGCCCGTCCCGCGCCGACTTCTCCATCCGTCGAGGAATCAGTCACTGCCGAGAGCTATTCTAGCTCGTCGGAGTTCTTTCCCGCTCCGATGTCTCCAGCGCCGTCCTCTTACACGAGCAGGATGGTTGTCGACGACGGAGACTTCTTCGACGGCGGTAAGGTGGCATCTTCGTCTCCTCGCGGAGGGGTTGACTTGACGGCGACGAAGGCCAGTAGCGTTTTGGCAAGCGAATTAGCCACGGTTGCGGTGGTGAATGCTGATTCCCGTGCAATTGGCGAAAGAGAGAGAGCAGACAAAGCAGGAGGATCAGCCATGGAAATGAAAGACCAAGCTCTGAATACTAAACCGAAGAAAGAAAAGACGTCAAAAGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTCTGGCTTCAGTGAATGTAAAACCAGCTAAAGCTGCAAAGCCCCCACAAAAATTTGATAATGCTTCAGTTACAGCCTCTGAGAAGAAAGGGGTTGATCGTTCACAAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCGCGGATGCAATATGATGATAAAAGCAGAGTGGAGAAAGCCAAAAGACGTGCTGTGGTAAAACAAACTGAAGTTAAGAACAGAGTTGAACTATTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTACCAGATCTTGAGGCAAAGTTTTTCCACCTTGGCCCTGTGCATCCCGCTGTTTATAAGGTAGGCTTGCAGTATCTGTCTGGAGATATAACTGGTGGCAATGCTCGTTGTATTGCTATGCTTCGAGCGTTTCAAGAGGCCATTAAAGACTACAGGGTTCCATCGGAAAAGACTTTGGTGAGAGACTTAACGGCAAGATTGAGTAGTTATGTTTCTTTTCTCATTGAGTGTCGACCACTTTCTATCAGTATGGGCAATGCAATTAGATTTCTCAAAAGTCGAATTGCCAAGCTACCTTTGACGTTGTCCGAATCAGAATCAAAAACCTCTCTTCAATCAGATGTTGAGCGTTTCATAAATGAGAAAATTATACTTGCCGACAAGGTGATAGTCAAGCATGCTATCACAAAAATAAGGGACGGTGATGTTCTTCTTACTTATGGGTCTTCATCGGCAGTTGAAATGGTACTGTTACATGCACACGAGTTAGGTAAACAGTTTCGAGTTGTAGTGGTAGACTCTCGTCCAAGACTTAGAGGGAAACTTTTGCTTCGTAGGCTTGTGGAGAAGGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGAATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTGTTGTCTAATGGGACAGTTTATTCAGCAGTTGGGACTGCTTGTGTTGCAATGGTTGCCCATGCATTTCGTGTCCCTGTTTTAGTATGCTGTGAGGCTTATAAATTTCATGAAAGGGTGCAGCATGATTCCATATGTTCAAATGAGCTTGGTGATCCTGACATCATTTCTAGGGTTCAGAGTAGAGAGGATGTGAATCACTTGGAAGGTTGGGCCCATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCAACACCTTCAGATTACGTTTCCATGATAATCACAGATTATGGCATGGTCCCACCCACAAGTGTACCTGTAATTGTAAGGGAATATAGCAGGGAACAGGTGTGGATATGA 1926 0.4663 MDARRAPRAVIDPKVRRVGFFAPPDRSQSGPPHLISLDVSPAANSLSPVMIPPPRHSSENLSLHARPAPTSPSVEESVTAESYSSSSEFFPAPMSPAPSSYTSRMVVDDGDFFDGGKVASSSPRGGVDLTATKASSVLASELATVAVVNADSRAIGERERADKAGGSAMEMKDQALNTKPKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPAKAAKPPQKFDNASVTASEKKGVDRSQEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEVKNRVELFRHLPQYEHGSQLPDLEAKFFHLGPVHPAVYKVGLQYLSGDITGGNARCIAMLRAFQEAIKDYRVPSEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESESKTSLQSDVERFINEKIILADKVIVKHAITKIRDGDVLLTYGSSSAVEMVLLHAHELGKQFRVVVVDSRPRLRGKLLLRRLVEKGLSCTYTHINAVSYIMNEVTRVFLGASSVLSNGTVYSAVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGDPDIISRVQSREDVNHLEGWAHTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYSREQVWI 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00310 641 SUPERFAMILY NagB/RpiA/CoA transferase-like 316 634 IPR037171 -
Viun5g00310 641 Gene3D - 428 634 IPR042529 -
Viun5g00310 641 MobiDBLite consensus disorder prediction 153 167 - -
Viun5g00310 641 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 41 638 - -
Viun5g00310 641 Pfam Initiation factor 2 subunit family 332 624 IPR000649 GO:0044237
Viun5g00310 641 MobiDBLite consensus disorder prediction 45 101 - -
Viun5g00310 641 MobiDBLite consensus disorder prediction 20 39 - -
Viun5g00310 641 MobiDBLite consensus disorder prediction 63 101 - -
Viun5g00310 641 MobiDBLite consensus disorder prediction 175 196 - -
Viun5g00310 641 MobiDBLite consensus disorder prediction 151 278 - -
Viun5g00310 641 MobiDBLite consensus disorder prediction 243 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00310 Viun-Chr5 1839176 1845573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00310 1 641 Eukaryotic Initiation Factors Gene Family AT5G38640 66.112 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00310 K03680 - gmx:100785938 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00310 5 1839176 1845573 Viun5g00310 5 1839176 1845573 ECH