Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00291 ATGACCATGGTTCCTTCTCAAAACGGGAAACATCAGAACATTAATAGGAGTGGTGATTATGTTATTTATGGTAACACGACAACGAGTAGTGCTATGAACCAGGTCATTGAAGTTGAAGGAGGCTACAATTGCTTACTAGGATCTGATTTTGTGGTGAGGAGACACATCATGGCTGAGGCTGAAGAATCATCCAGACACAACAACAACAATACCAACGAGGAAGCTGAACCTGGTGGCTGTGGTTCAACCTCAAAGGATGAAGAAGTAGAAGGAACAAACACAAACACCAACACCAACACCAATATCAATAACAACAATAACTGGCTTCAATTAGGCATAGGTTTGACAAGTACAAAGGAAGAAACCGTTCCGACAACAATCGCCTCAGGGCCTGTGGAGTTAGAGTTGCTGCCCTCACGGCGGAGGTTCGATCAGCCGGCGGCGTTTTTTCCGGTGGTGGCTTCCGGGAGAGGAGGGTCTAGTTTTGGTGGTTCTTCCTCTTTGGTTTTTGAGCATCAAACGACGTCGCCTTCTTCCATGTCCATGTCTATGGGTAGTGGTCCAATTACCTCAACCTTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTACTTCCTCCTTCTATTCCTATTATGCCCTCTTCTTCCTCTTTCACTCATCTCCCACCACCTCCTCCTCCTTCTTCTTCTTCTTCCTCATTACAAACCTGTCACTCCTCTTTCAGGCCTCCCTTAGGATCCTACTTTCCCACACCCTTTCATCACTTCCCTTCTTCTTCTTCTTCTGGATTTGATCAATACGACGTGGCCGGAGCAGGACCAAGCTCCGATGTCACCGTTCGAGTTGTCGATCCTCCCAGAAGACCTCATTCTGGAATATGGTTCATGTTACAAGCCTCTCAGAATCAAGCGAAAGAACCGTTCTTGCCACAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCAGAGATAGAGATAAGATGCAGAGGGCAGCAACTTTTACCTTTCTTAACGTTGCAGCATGTGAGAGACAACATTTGGAGTCCCAGAGACACCACCACAACACCTTTGCTTTCGGATTCCTCAACCTCGGATCATGTCATGGTTCTTCATTATGGTAGAACCACTGCTTAA 1203 0.458 MTMVPSQNGKHQNINRSGDYVIYGNTTTSSAMNQVIEVEGGYNCLLGSDFVVRRHIMAEAEESSRHNNNNTNEEAEPGGCGSTSKDEEVEGTNTNTNTNTNINNNNNWLQLGIGLTSTKEETVPTTIASGPVELELLPSRRRFDQPAAFFPVVASGRGGSSFGGSSSLVFEHQTTSPSSMSMSMGSGPITSTFGHQEMMNWAFGPLLPPSIPIMPSSSSFTHLPPPPPPSSSSSSLQTCHSSFRPPLGSYFPTPFHHFPSSSSSGFDQYDVAGAGPSSDVTVRVVDPPRRPHSGIWFMLQASQNQAKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEIRCRGQQLLPFLTLQHVRDNIWSPRDTTTTPLLSDSSTSDHVMVLHYGRTTA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00291 400 MobiDBLite consensus disorder prediction 217 240 - -
Viun5g00291 400 Gene3D - 288 382 - -
Viun5g00291 400 MobiDBLite consensus disorder prediction 86 103 - -
Viun5g00291 400 PANTHER RING FINGER PROTEIN 1 398 IPR044171 GO:0007275
Viun5g00291 400 MobiDBLite consensus disorder prediction 62 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00291 Viun-Chr5 1683908 1692237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00291 308 396 C3H Transcription Factor Family AT3G23060 38.947 1.51e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00291 - - gmx:102664769 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00291 5 1683908 1692237 Viun5g00291 5 1683908 1692237 ECH