Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00239 ATGCGCATGGAGATAACCTACGCATCGCCAAGTTTCTACGACCTCCCTGCCGCCGCTGCTTCAACCATGCCGTCCTCCATGACCGGCGCACGTCCTGTAAGGATCATTCCTCTTCAGCATCCGACCGCCACCTCGTCCTCATCGTCTCCGTCAGCGAACGTAGCCTTCGCGCGGTGGACAGAGAAGCTCAGGCGAATGACGTGGCTCGAATGGCTCGAGTTCTTCCTCCCTTGCCTACGCTGGATTCGCATCTATAAATGGCGCGAGTATTTTCAGGTCGATCTCATGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCGTATGCAAAATTGGCTGGACTTGAACCGATATATGGACTCTACTCTGGTTTTGTGCCTATATTTGTGTATGCCATATTTGGATCTTCTCGCCAGCTTGCAGTAGGCCCAGTTGCATTGGTTTCCCTCTTGGTATCTAACGTGCTAAGTGGCATAACTGACTCGTCCGGTGAATTATACACAGAGCTTGCAATATTACTGTCCCTTATGGTGGGGATAATGGAGTGTATAATGGGACTATTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGATTTACAACTGCTTCGGCTATTGTCATTGGTTTATCTCAAGCTAAGTACTTCGTGGGGTATGATATAGACAGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGATGGAGCAGATAAGTTTTCATGGCCACCTTTTGTGATGGGATCCATTATGCTTACGATACTCCTTGTCATGAAACACCTGGGAAAATCAAGGAAGTACTTGCGATTCTTGAGAGCTGCTGGTCCTCTTACAGCAGTAGTTCTGGGAACATTATTTGCAAAAGTTTTTCATCCACCGTCAATTTCTTTGGTCGGAGATATACCTCAAGGCTTACCAAAATTTTCTGTTCCAAAAGCTTTTGAGTATGCAAAGTCCTTAATTCCAACTGCTATTCTCATAACTAGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTACGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACCACAGGATCCTTTTCAAGGTCAGCTGTAAATCATGAGAGTGGTGCAAAATCTGGGGTATCAGGGCTTGTTTCAGGAATTATAATGATCTGTGCACTAATGTTTCTAACACCAGTATTTGAGTACATACCTCAGTGTACCCTTGCTGCTATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTACGAGGAGGCCATTTTTTTGTGGCGTGTTGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGTACTACAACATTGTTCCTTGGTATTGAGATTGGCGTCCTTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGGAATGTTAAACAGTATCCTGAAGCATATTCATATAATGGAATTGTAATTGTTCGTGTTGATGCTCCAATATATTTTGCAAACACGAGTTTCATAAAGGACAGGTTGCGTGAATATGAAGTTCATGTTGATAGTTCTAAAAACCGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTTGAGATGGCACCTGTGACCTACATAGATTCTAGTGCTGTTCAAGCTTTGAAAGACTTATATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCTAATCCAAGCCCAGAAGTTCTGCTCACCTTCTCAAAATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGCGGGACCTGACAGTTCACTCACGCCACTTTCTTCATTTGAAGATAAACCAAGTTTGTTTGCTCGATTGTCGAAAGACAGAGCGGAGAAGTTTTCAGTGACCGACTTAGAATCTGGTAATGGCAGGCCTCCACACCCCAAGGACAGAGATTCCCAGTTGGAGCCATTGTTGCCCAAAGAACGTTGA 2124 0.4383 MRMEITYASPSFYDLPAAAASTMPSSMTGARPVRIIPLQHPTATSSSSSPSANVAFARWTEKLRRMTWLEWLEFFLPCLRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLEPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGITDSSGELYTELAILLSLMVGIMECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFVGYDIDRSSKIIPVVKSIIDGADKFSWPPFVMGSIMLTILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTLFAKVFHPPSISLVGDIPQGLPKFSVPKAFEYAKSLIPTAILITSVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGLVSGIIMICALMFLTPVFEYIPQCTLAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYSYNGIVIVRVDAPIYFANTSFIKDRLREYEVHVDSSKNRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTFSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKAGPDSSLTPLSSFEDKPSLFARLSKDRAEKFSVTDLESGNGRPPHPKDRDSQLEPLLPKER 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00239 707 MobiDBLite consensus disorder prediction 677 707 - -
Viun5g00239 707 PANTHER SULFATE TRANSPORTER 56 643 IPR001902 GO:0016020|GO:0055085
Viun5g00239 707 MobiDBLite consensus disorder prediction 687 707 - -
Viun5g00239 707 NCBIfam sulfate permease 77 634 IPR001902 GO:0016020|GO:0055085
Viun5g00239 707 ProSiteProfiles STAS domain profile. 514 638 IPR002645 -
Viun5g00239 707 SUPERFAMILY SpoIIaa-like 516 638 IPR036513 -
Viun5g00239 707 CDD STAS_SulP_like_sulfate_transporter 515 631 - -
Viun5g00239 707 Gene3D STAS domain 494 642 IPR036513 -
Viun5g00239 707 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Viun5g00239 707 FunFam Sulfate transporter 31 494 641 - -
Viun5g00239 707 Pfam STAS domain 515 634 IPR002645 -
Viun5g00239 707 Pfam Sulfate permease family 91 464 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00239 Viun-Chr5 1397224 1405304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00239 31 668 Inorganic Solute Cotransporters AT5G13550 74.531 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00239 K18059 - gmx:100794754 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00239 5 1397224 1405304 Viun5g00239 5 1397224 1405304 ECH