Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00209 ATGGCGGATACGATTGTGGTGTTTCTGATAGACAAATTGACGAGGCTGTTGGTGGAGGAAGCCAAACTTCTCGCCGGCGTGCGCGATCAAGTGGCGTCGTTGCAGAGCGAGCTCCGCTTCATGAATCTCTTCCTCAGGAACTCTCAAGGGAAGCGCAAAGAGCATGACATGGTGGCGGAACTGGTCAGCCAGATCAGAGACGTGGCGCACGAGGCCGAAGACGTCATCGACACCTACGTCGCCGGCGTCATCAAGCAGAGCCGGAGAAACGTGATCGGGAAAGTCGGATTCCGCGGTGTGGACCACGCGCTCATGCTTCACCAGGTGGCCGGGAAGGTCGACGGGATCAAGGCTCGAATCAAAGAGATCTTCGACAACAAACAGAGGTACGGCATCGAGGACGGAAAGAGGGGCGGCGAAGAGGAAGCGGAGCGGATTCGGAAGCAGAGGAGGGAGGTGGAGGAGGAAGAGGTGGTAGGGTTTGCGCTGGACTCCAAGGTTGTGATTGAGAAACTCACGGTGTCGGATTCGCGCCTTAAAGTTGTTTCCATCGTTGGAATGGGTGGTTTGGGGAAAACCACGCTTGCTCGAAAGGTATATAACTCTAACCGAGTGAAGAACATGTTTCCTTGTCGTGCGTGGGGTTATGTGTCTAATGATTATCGACCCAGGGAGTTTTTCTTGAGCCTTCTCAAGTGTTTGCTGTCCACATCCAAGTACAGTGGTTTGTTCAAGAAAAGAGAAGAGACGAGTGTGAGTGATGAAGAGCTGAAGATGAAGGTGCGAGAATGCTTAAACAGAAGCAAGTATTTGGTTGTGGTGGACGATGTTTGGCAGAAACAGGTGTGGAATGAGGTTAAAGGGGCATTTCCCGATGATCAAAACGGAAGCAGAATATTGATGACTACTCGTTGGGCTGAGGTGGCTTCTCACGCTGGTCCTGTTCCTCCCTACGCTCTTCCCTTCCTCACCAAAGAAGAAAGTTGGGAGCTGCTTTCCAAGAAGGTGTTTAGGGGAGAAGAGTGTCCTTCGGATTTAGAGTCTCTGGGAAAATTGATCGCTGAAAGCTGTGATGGGTTGCCACTTGCCCTTATTGTGATGGCAGGGATTTTGGGTAACAAGAAGTCACCGAGGGATTGGTCTAGAATCAAGGACCATGTCAATTGGCATCTTGGGAGGGACAACACACTCAAGGACATACTCAAACTCAGCTATGATTCCTTGCCCGCGAGGTTAAAGCCTTGTTTTCTGTATTTTGGCATGTACCCTGAAGATTATAGGATCCCCGTGAAGCAGTTGATCCAGTTGTGGATATCCGAAGGGTTATTAACACAAGAAACTTCTGTAAGCCAAGACATACCAGAGCCGGAATACATCGCGGAAGAGTACTTGGATGAACTGGTGGATCGAAGCTTGATCCAAGTGGTAAGTAGAACCAATGATGGGGGAGTCAAAACATGTCGGATTCACGATCTTCTTCGCGACCTCTGCATATCCGAGAGCAGGGAAGACAAGTTTTTCGAGGTTTGTGGAGAGATTGATTTTCAGAACCTCAATAGTTGTCCCCGTAAGTTGTCTCTCCAGGGTACTCTGTTTCATTTCTCTTCGAGTATCGTATCTGATTACACCATCTCGGCGACGCGTTCCTTGTTATGCTTCGGGCAAGAGGTGTACAAGGTTAAGGCAAATCACTGGAGATGGCTTCTCAAGAGCTTCAGGCTGGCTCGCGTGTTGGATTTAGGACGAATGAATGTTAACTCCATACCCACTGATTTGGAGAAGCTCATTCATTTAAGGTACTTGAGGATACACTCTCATAATCTTGAAACTATTCCACCTTCTATATGCAGATTGTGGAATCTAGAAACCTTGGATTTGAGAGGTTCGCCTATAAAATCCTTTTCTGGTGAATTATGGCAACTTAAACAACTAAGGCATCTTCTGCTGTTTGGACCCGTTGGGCTCCCAGAAATGCCCTCAGAAAGTAAAACCATGCCCAATCTTCAAACCCTCTCAACCGTGGCTCTTGATCCTCGCACAACATCATTGTTGGATAGTCGTAGGTTCCCAGGGATGACAAAATTGGGTATACATTACGAAAGACGCGACAAGTGCAATGCTCGTATACAGTTACAGAGCCTCCATCGCCTGAGCCATCTCCGGAAGCTGAAAGTGATAGGCACTACTGAGATTCCTCAAAATGCAAATATGTTTCCGTCGAACATCACCAAGATATCCCTCACAAAGTTTGGTTTCTTCAACTCCACTGTCATGCATATGCTAGGAAAGCTTCCCAACCTTCAAGTTCTGAAATTGTCATCGCAGACGAATGATACTAGATTTGACCTGCATTGTGCCACGGGAGGGTTCCTTCAGCTTCAAGTGTTTGAGATGGTTGCAATCAAGGTCAAGGTGTGGAGAGTGGACAGAGGTTCAATGCCACGTGTTCGTCGTTTGGTCGTCAGAAGCTGCAAATCCTTGACTCAGCTTCCAAAAGAAGTGTGGTCTTTGAATACCTTGCGGGAAGTTCAGGTCTTGTGGCCCTGTACAGAATTGGCAAAAGGACTCCAAAATTTGGTGATGAACAATGCTTGTAAGCTCGTCGTCTATCCTCTCTCAGCAAATGATGAATTAGATTTTCTTGAAATCAATGGCTAA 2658 0.4774 MADTIVVFLIDKLTRLLVEEAKLLAGVRDQVASLQSELRFMNLFLRNSQGKRKEHDMVAELVSQIRDVAHEAEDVIDTYVAGVIKQSRRNVIGKVGFRGVDHALMLHQVAGKVDGIKARIKEIFDNKQRYGIEDGKRGGEEEAERIRKQRREVEEEEVVGFALDSKVVIEKLTVSDSRLKVVSIVGMGGLGKTTLARKVYNSNRVKNMFPCRAWGYVSNDYRPREFFLSLLKCLLSTSKYSGLFKKREETSVSDEELKMKVRECLNRSKYLVVVDDVWQKQVWNEVKGAFPDDQNGSRILMTTRWAEVASHAGPVPPYALPFLTKEESWELLSKKVFRGEECPSDLESLGKLIAESCDGLPLALIVMAGILGNKKSPRDWSRIKDHVNWHLGRDNTLKDILKLSYDSLPARLKPCFLYFGMYPEDYRIPVKQLIQLWISEGLLTQETSVSQDIPEPEYIAEEYLDELVDRSLIQVVSRTNDGGVKTCRIHDLLRDLCISESREDKFFEVCGEIDFQNLNSCPRKLSLQGTLFHFSSSIVSDYTISATRSLLCFGQEVYKVKANHWRWLLKSFRLARVLDLGRMNVNSIPTDLEKLIHLRYLRIHSHNLETIPPSICRLWNLETLDLRGSPIKSFSGELWQLKQLRHLLLFGPVGLPEMPSESKTMPNLQTLSTVALDPRTTSLLDSRRFPGMTKLGIHYERRDKCNARIQLQSLHRLSHLRKLKVIGTTEIPQNANMFPSNITKISLTKFGFFNSTVMHMLGKLPNLQVLKLSSQTNDTRFDLHCATGGFLQLQVFEMVAIKVKVWRVDRGSMPRVRRLVVRSCKSLTQLPKEVWSLNTLREVQVLWPCTELAKGLQNLVMNNACKLVVYPLSANDELDFLEING 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00209 885 Pfam Rx N-terminal domain 6 88 IPR041118 -
Viun5g00209 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 419 IPR027417 -
Viun5g00209 885 Coils Coil 136 156 - -
Viun5g00209 885 PRINTS Disease resistance protein signature 762 778 - -
Viun5g00209 885 PRINTS Disease resistance protein signature 264 278 - -
Viun5g00209 885 PRINTS Disease resistance protein signature 181 196 - -
Viun5g00209 885 PRINTS Disease resistance protein signature 357 371 - -
Viun5g00209 885 SUPERFAMILY L domain-like 488 844 - -
Viun5g00209 885 FunFam Probable disease resistance protein At1g61300 140 315 - -
Viun5g00209 885 Gene3D Ribonuclease Inhibitor 553 883 IPR032675 -
Viun5g00209 885 Gene3D - 410 499 IPR036388 -
Viun5g00209 885 Pfam NB-ARC domain 168 406 IPR002182 GO:0043531
Viun5g00209 885 FunFam Probable disease resistance protein At1g63360 405 499 - -
Viun5g00209 885 Gene3D - 140 314 IPR027417 -
Viun5g00209 885 CDD RX-CC_like 2 125 IPR038005 -
Viun5g00209 885 PANTHER DISEASE RESISTANCE PROTEIN RP 33 806 IPR044974 GO:0006952
Viun5g00209 885 Gene3D - 322 409 IPR042197 -
Viun5g00209 885 Gene3D - 6 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00209 Viun-Chr5 1238514 1241532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00209 179 672 WRKY Transcription Factor Family AT5G45050 22.932 6.53e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00209 - - gmx:100780593 1055.05