Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00206 ATGTCCTACCAGCATAAAAGTTTTTGGATGCCACGAGATGCTGGCTGTATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATGTTCAGCAGCAAGAAACAAGCAGTTGAAGATGTCAGTGGTAGGCCAATTTCAGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTCTGTCACGGGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACAGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTAAGTGGAAATATAAACATGGGAAGGAAGGATTTTGAGCATCAATATGGTAATGATCCTTCAGTGGGATTGTCGATATCTCATTCCATTGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCATCCATGGGGCACTCCTATAGCCGGGAAGATGATAGTACAATTTCAGTAGGTGCTGGTTACAATAAGAATGATGGCAATATTTCGTTGGGTCCTACTTATAACAATAGAGGTGACAACACCATTGGTATGGGGACTAGAATAAGTAGCAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGGGCTTTATGCTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGAGCTTTATATCAATTGGTCCAACCTATGGTAAATCAGGAGAGAATTTTATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGTTCAGCATATGAGAAGGTGGATTCAAATATTGCATCAACACTTCCATCATATGACAGAGGAGATTCCAGTTCTTTACCTGTGGGTCAAAATCACCATAAGGGTCAGAGCGGTACAATATCTTTTGGAGGTTTTCATGATGACCCTGAAGCAAATCCCTCTGGTGGAATCATCAGTGGCTATGATCTGTTGATAGGAAACCAAAACTCAGCTCAAGTTTTGGATGGTCAGAATGATCTGACTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAACTCAATACTAAAAATGATAATGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACCGGTATTTTTGATGGTGTCCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACTGGTTACTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCCGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAACTGAAAAATACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAGGATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTATGGAAAGGATGAAGTGATAATTCCATCTTAA 1752 0.4013 MSYQHKSFWMPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEMFSSKKQAVEDVSGRPISGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLARTVNLVDKNVPSIVSGNINMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSASMGHSYSREDDSTISVGAGYNKNDGNISLGPTYNNRGDNTIGMGTRISSKTDDNLLSVAHNFNKGDGGFMLMGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHESFISIGPTYGKSGENFITVAPYDKGTDHLISMGSAYEKVDSNIASTLPSYDRGDSSSLPVGQNHHKGQSGTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQVLDGQNDLTETNTESLVNSIPKLNTKNDNVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRGWKASYQAATRELQRIYGKDEVIIPS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00206 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Viun5g00206 583 MobiDBLite consensus disorder prediction 344 363 - -
Viun5g00206 583 MobiDBLite consensus disorder prediction 416 443 - -
Viun5g00206 583 MobiDBLite consensus disorder prediction 344 376 - -
Viun5g00206 583 PANTHER AUTOIMMUNE REGULATOR 8 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00206 Viun-Chr5 1208702 1215031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00206 438 564 PHD Transcription Factor Family AT3G53680 55.906 8.70e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00206 - - gmx:100782217 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00206 5 1208702 1215031 Viun5g00206 5 1208702 1215031 ECH