Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00191 ATGGATAACTATGGATCATCTTCTCCATACCGGTATCCAAGCCCATATGGGTACCCTCCCAACCCTCATCAACCATACCCTCCTCCTCCAGTTTCAGCTCCTGATCCATATGCACACGCTCCTTATCCTTCATATCCTTACATTTCTTCACATTCCTTCAACTATTCTCACCATGGACCTCCTAGACCATCTTCACATTCTGGCCATTTTGAGTATTCTTACCCTCCTAACGCCATGGACTATTCTCACCCTCCTCCGCCATCTTATTCTCCTCCTCCACCATCTTATTCTCCTCCACCATCTTATTCTCCTCCTCCCACTTATCCTTATCCCTACCATGTGCCTCCACCAAATCATGGATCTCCCAGGCCTCCCCTTTTTCACCAGCCCAGTTACCAACATGGTTCACCTCAATACTATTATCCACCAAAGGAGGCCTATTCGCCGCCTCATGATATCCATTCCGGCACCAATAGCTTCTCTAGTCCCTATTGGCAGGATAACACAAGCGCGGTTGAAGGAGGTAAAGTGTCACAAAGTAGTGACAATTTGAAGCCTTCTCAGGGTTCTTCTTACCCAGCTTTGGATGATCTTATGAGCAATGTTAGGTTGTCTGATGGCCAGCCAACTGCTCCTGCATCACCTCCTGCGCCTGCAGGGCATCCTCTTATGCATTCCATTTCAGTTCCTAAGTTGCAACAGAAGAAGGAGGATTTTTATGGATGTTCTAATAACTCCTTCTCCGGGTGGGGATCCTCCTATCCCACCCGGATGGGTTCTTCTAAGCTTTCAGATTTTTCTGGCTCATTTAATGAATCAATGTATGGTGAGCGTTTGCAGCTTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTCCATGGAAATCTAGATATATGGGTCCATGAAGCCAAGAATCTTCCAAATATGGATATGTTTCACAAAACTTTAGGTGATATGTTTGGTAAATTGCCTGGTAGTGTGAGCAATAAAATTGAAGGAACTATGAATTCGAAGATTACTAGTGATCCTTATGTATCGATTTTAGTATCCAATGCTGTAGTTGGGAGGACTTATGTCATCAGCAACTCTGAGAACCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCAGAAGTACACTTTCTTGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCGAATATACTCAGGGGAAACAGTTGAAGGATTTTTCCCTATCCTGAATAGTAATGGGAAGCCATGTAAGCAAGATGCTGTCCTGAGGCTATCCATTCAGTACATACCTATGGAGAAACTGAGCATTTATCACCAAGGAGTTGGAGCAGGGCCTGAATACGTGGGGGTTCCTGGAACATATTTTCCTTTGAGGAGAGGTGGAACTGTTACTCTGTATCAAGATGCTCATGTTCCAGATGGAATGCTCCCTAATGTGTTGCTTGACAGTGGGATGTACTATGCGAATGGAAAGTGTTGGCAAGATATGTTTGACGCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGTTGGTCAGTGTGGCATAAAGTAAGGTTGGTTAGGGATGCTGCTCGTTATTCTCCAGATTATACCTTGGGTGATCTTCTAAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTGCTTATCTGGGATGATCCTACATCAAGAAGCATTTTAGGCTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGTAGTGGTAAACGACACAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCACCAGAAAACTGTTATTGTTGATGCTGATGCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGACGGGCGATACGATACTCCCCTCCACCCTATTTTTAGAACATTGAATACAACGCATAAGGATGACTACCACAATCCCACTTTCACGGGTAATGTTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAGAGCTTCAAAACCTCACGGGATTAAAAAGTTGAAAATTTCATACGATGATGCTTTGCTAAGGTTGGAAAGAATTCCAGATTTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATGATCCTGAAGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCCAATTCGGTTAAGGAGTTTCCGAAGGATCCAAAAGTTGCAACAAGCAAGAATCTAGTATGCGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTTAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAGTATTTTATCGGCTCCTCATACAATTGGGGTCAACATAAAGACCTTGGTGCTGATAACTTAATCCCAATGGAAATTGCTCTAAAGATTACTGAAAAGATAAAAGCACACGAAAGATTTGCAGTGTATGTTGTTATTCCCATGTGGCCAGAAGGAGTTCCAACAGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACCATTTACAAGGCTTTGGTTGAAGCTGGGCTTGAAGCAGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAAGTCATCAGTATGTATGATAATGTTTCTGTGACAGGAGCTCCTCCCCCAGCAAATAGTCCTCAAGTGGCTAGCAGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATACTGGGGTCTGCAAACATCAACCAGCGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGCGCCTATCAACCTCATTATACATGGGCAAGAGCACAAACTTATCCACACGGTCAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACTATTGAGGACTGCTTCTTGCAACCTGAGAGTATTGAATGTGTAACTAGGATCAGAGCAATGGGAGAAATGAACTGGAAACAATTTGCAGCAGATGAAATAACAGAGATGAAAGGGCATCTACTGAAATACCCTGTAGATGTTGATAGAAAGGGCAAGGTTAGATCACTTCCAGACCAAGAAGAGTTCCCAGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAGGAGAATCTAACCATTTGA 3336 0.4269 MDNYGSSSPYRYPSPYGYPPNPHQPYPPPPVSAPDPYAHAPYPSYPYISSHSFNYSHHGPPRPSSHSGHFEYSYPPNAMDYSHPPPPSYSPPPPSYSPPPSYSPPPTYPYPYHVPPPNHGSPRPPLFHQPSYQHGSPQYYYPPKEAYSPPHDIHSGTNSFSSPYWQDNTSAVEGGKVSQSSDNLKPSQGSSYPALDDLMSNVRLSDGQPTAPASPPAPAGHPLMHSISVPKLQQKKEDFYGCSNNSFSGWGSSYPTRMGSSKLSDFSGSFNESMYGERLQLVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNSKITSDPYVSILVSNAVVGRTYVISNSENPVWLQHFYVPVAHHAAEVHFLVKDSDVVGSQLIGIVAIPVERIYSGETVEGFFPILNSNGKPCKQDAVLRLSIQYIPMEKLSIYHQGVGAGPEYVGVPGTYFPLRRGGTVTLYQDAHVPDGMLPNVLLDSGMYYANGKCWQDMFDAISQARRLIYITGWSVWHKVRLVRDAARYSPDYTLGDLLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPLHPIFRTLNTTHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRASKPHGIKKLKISYDDALLRLERIPDFIGINDAPSVGEDDPEVWHVQIFRSIDSNSVKEFPKDPKVATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWGQHKDLGADNLIPMEIALKITEKIKAHERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREVISMYDNVSVTGAPPPANSPQVASRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWARAQTYPHGQIHGYRMSLWAEHTGTIEDCFLQPESIECVTRIRAMGEMNWKQFAADEITEMKGHLLKYPVDVDRKGKVRSLPDQEEFPDVGGKIVGSFLAMKENLTI 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00191 1111 MobiDBLite consensus disorder prediction 56 224 - -
Viun5g00191 1111 MobiDBLite consensus disorder prediction 13 34 - -
Viun5g00191 1111 Gene3D Endonuclease Chain A 498 736 - -
Viun5g00191 1111 PRINTS Proline rich extensin signature 13 25 - -
Viun5g00191 1111 PRINTS Proline rich extensin signature 25 46 - -
Viun5g00191 1111 PRINTS Proline rich extensin signature 83 100 - -
Viun5g00191 1111 PRINTS Proline rich extensin signature 104 129 - -
Viun5g00191 1111 MobiDBLite consensus disorder prediction 1 34 - -
Viun5g00191 1111 Gene3D Endonuclease Chain A 768 1011 - -
Viun5g00191 1111 Pfam C2 domain 297 423 IPR000008 -
Viun5g00191 1111 SMART pld_4 957 984 IPR001736 GO:0003824
Viun5g00191 1111 SMART pld_4 622 657 IPR001736 GO:0003824
Viun5g00191 1111 MobiDBLite consensus disorder prediction 79 124 - -
Viun5g00191 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 957 984 IPR001736 GO:0003824
Viun5g00191 1111 ProSiteProfiles C2 domain profile. 275 421 IPR000008 -
Viun5g00191 1111 SUPERFAMILY Phospholipase D/nuclease 474 722 - -
Viun5g00191 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 622 657 IPR001736 GO:0003824
Viun5g00191 1111 FunFam Phospholipase D delta 292 439 - -
Viun5g00191 1111 MobiDBLite consensus disorder prediction 152 195 - -
Viun5g00191 1111 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 295 446 IPR035892 -
Viun5g00191 1111 CDD C2_plant_PLD 292 444 - -
Viun5g00191 1111 Gene3D C2 domain 292 437 IPR035892 -
Viun5g00191 1111 FunFam Phospholipase D 770 1003 - -
Viun5g00191 1111 Pfam Phospholipase D C terminal 1031 1101 IPR024632 -
Viun5g00191 1111 SUPERFAMILY Phospholipase D/nuclease 803 1043 - -
Viun5g00191 1111 SMART C2_3c 298 420 IPR000008 -
Viun5g00191 1111 PANTHER PHOSPHOLIPASE D 287 1102 IPR015679 -
Viun5g00191 1111 Pfam Phospholipase D Active site motif 623 657 IPR001736 GO:0003824
Viun5g00191 1111 Pfam Phospholipase D Active site motif 958 984 IPR001736 GO:0003824
Viun5g00191 1111 FunFam Phospholipase D delta 498 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00191 Viun-Chr5 1110997 1120258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00191 79 1111 Phospholipase D Gene Family (Wang group) AT2G42010 68.868 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00191 K01115 - gmx:100801286 1883.61