Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00190 ATGATCTTTAGAACACTTGTCCTATTTCTGGCTTTTATGGTGACAAATTCAACAGCTCTTGCGGATCAACACACATACATAGTTCACATTGACAAGACTAAGATCAGAGCCTCAATTCATTCTCAAGACAACTCAAAGCCATGGTTTGAATCCATCATTGATTTTATTTCTGAAGCTTCAATGCAAGAAGACGGAGAAGAAGAGATTTTAGCCCCTCAACTCCTTTATGCCTATGAAACCACCATGTTTGGTTTTGCTGCTCATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTTGAGGGTTTCCTCTCAGCCATACCTGATGAACTATCAACACTCCACACAACGTACAGTCCACAGTTTCTTGGCCTAAAGAGTAGAAGAGCACTTTGGAGTGCTTCTAACTTGGCCAATGATGTGATCATTGGGATTCTTGATTCAGGAATATGGCCTGAACACAGCAGTTTCCAAGACTCAGGATTTTCCCCAGTGCCTTCTCATTGGAAAGGTGTTTGTGAGAAAGGCACCAAGTTCTCTCCCTCAAATTGCAACAAGAAGCTTATTGGTGCAAGAGCCTATTTCAAGGGGTATGAAAAATACTTTGGAAGAAAAATCAATGAAACAGTGGATTACCTTTCTGCAAGAGATTCCCAGGGGCATGGAACACACACTGCTTCAACTGCAGCAGGTGATGTGGTGAAAAACGCCAACTTTCTTGGCCAGGCTAGAGGTACAGCAACTGGAATGAGGTACACTTCTAGAATTGCAGCTTATAAAGTATGTTGGTCTTCTGGGTGTACTAATTCTGATGTATTAGCTGCTATGAACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGAGTATTCCAAAACCTTTTTACACTGATAGCATTGCCATAGCTTCATTTGGGGCAACCCAGAAAGGGGTTTTGGTTGCTTGCTCCGCAGGCAATTCAGGCCCTTTTCCATCAACACTTGGAAATGGTGCTCCATGGATCATGACTGTTGCTGCTAGCTCCACAGACAGAACCTTTCCAACAAAAGTAAAGCTTGGGAATGGACAAATTTTCAAAGGGTCATCTTTATATGAAGGTAAGAAGACAACCCAATTGCCCCTTGTCTATGGAAAATCAGCAGGTCCAACTAAAGAAGCACAGTATTGCACTGGAGGCTCTCTTGATCCAAAGCTTGTGCATGGGAAAATGGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAGAAAGGAGAGGAAGTGAAAGTGGCTGGTGGAGCTGGAATGATTCTTCTCAACAATGAATATCAAGGAGAAGAACTTTTTGCTGACCCTCATGTTTTACCAGCCACATCCTTGGGGGCTTCTGCAAGCAAGATTGTTAGAAGCTATAGTGAATCTGTTAAAAAAAGACCAACAGCTTCAATTTCCTTTATGGGGACAAGGTTCAGGGACCCTGCACCAGTGATGGCAGCATTTTCTTCAAGAGGACCAAGTTTAGTGGGACCAGAAGTGATTAAGCCTGACGTGACTGCACCTGGTGTGAACATTTTGGCTGCTTGGCCACCCAAAATTAGCCCAAGCTTTCTCAAAAGTGACAAAAGAAAAGTATCATTCAACATACTTTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTGCTAAAATCTTTGCACAAAGATTGGTCCCCTGCAGCCATTAAATCTGCTCTGATGACTACTGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCTTCTAATAACTCACCATTGGCCACTCCCTTTGTTTTTGGTTCAGGCCATGTTAACCCTGTGAGTGCTTCTGATCCAGGGTTAGTGTATGATATCAGCACCAAAGACTACTTCAATTATTTTTGCAGCATAAACTATACTTCTTCTCAGATTGCTTTATTATCAAGAAGTAACTTTGTATGTTCTAAAAAAGCAGTTCCACAAGCTGGTGACTTGAACTACCCTTCATTTTCTGTTCTATTTGGCAGAAGTGCCTTTAATTCTAGTGTGACATACAGAAGGGTTGTCACAAATGTTGGAAAATCTCAAAGTTCTTATGCAGTTAAAGTGGAACAACCGAATGGAGTTTCGGTTAGTGTTGAACCAAGGAAATTGAAGTTTGAAAAACTGGGTCAGAAATTAAGGTATAGTGTGACATTTTTGGCAACTGGAGGAGGTAAAGTTGGTGGTAGCTCATCGTTTGGGTCACTGATTTGGGTATCTGAAAGATATAAAGTTAGAAGTCCTATAGCAATAACCTGGCAATAG 2313 0.4168 MIFRTLVLFLAFMVTNSTALADQHTYIVHIDKTKIRASIHSQDNSKPWFESIIDFISEASMQEDGEEEILAPQLLYAYETTMFGFAAHLSKKHLKYLNQVEGFLSAIPDELSTLHTTYSPQFLGLKSRRALWSASNLANDVIIGILDSGIWPEHSSFQDSGFSPVPSHWKGVCEKGTKFSPSNCNKKLIGARAYFKGYEKYFGRKINETVDYLSARDSQGHGTHTASTAAGDVVKNANFLGQARGTATGMRYTSRIAAYKVCWSSGCTNSDVLAAMNQAVSDGVDVLSLSLGSIPKPFYTDSIAIASFGATQKGVLVACSAGNSGPFPSTLGNGAPWIMTVAASSTDRTFPTKVKLGNGQIFKGSSLYEGKKTTQLPLVYGKSAGPTKEAQYCTGGSLDPKLVHGKMVACERGINGRTEKGEEVKVAGGAGMILLNNEYQGEELFADPHVLPATSLGASASKIVRSYSESVKKRPTASISFMGTRFRDPAPVMAAFSSRGPSLVGPEVIKPDVTAPGVNILAAWPPKISPSFLKSDKRKVSFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDMASNNSPLATPFVFGSGHVNPVSASDPGLVYDISTKDYFNYFCSINYTSSQIALLSRSNFVCSKKAVPQAGDLNYPSFSVLFGRSAFNSSVTYRRVVTNVGKSQSSYAVKVEQPNGVSVSVEPRKLKFEKLGQKLRYSVTFLATGGGKVGGSSSFGSLIWVSERYKVRSPIAITWQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00190 770 FunFam Subtilisin-like protease SBT1.5 636 770 - -
Viun5g00190 770 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Viun5g00190 770 FunFam Subtilisin-like protease SBT1.5 140 358 - -
Viun5g00190 770 Pfam Subtilase family 139 588 IPR000209 GO:0006508|GO:0008236
Viun5g00190 770 CDD Peptidases_S8_3 113 583 IPR034197 -
Viun5g00190 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Viun5g00190 770 Pfam Fibronectin type-III domain 666 767 IPR041469 -
Viun5g00190 770 Gene3D Peptidase S8/S53 domain 140 632 IPR036852 GO:0004252|GO:0006508
Viun5g00190 770 SUPERFAMILY Subtilisin-like 114 623 IPR036852 GO:0004252|GO:0006508
Viun5g00190 770 Gene3D - 636 769 - -
Viun5g00190 770 Gene3D - 347 486 - -
Viun5g00190 770 FunFam subtilisin-like protease SBT1.5 347 486 - -
Viun5g00190 770 Pfam PA domain 376 460 IPR003137 -
Viun5g00190 770 CDD PA_subtilisin_like 354 479 - -
Viun5g00190 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 115 IPR037045 -
Viun5g00190 770 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Viun5g00190 770 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Viun5g00190 770 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Viun5g00190 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 766 IPR045051 -
Viun5g00190 770 ProSiteProfiles Serine proteases, subtilase domain profile. 117 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00190 Viun-Chr5 1105591 1108591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00190 23 770 Subtilisin-like Serine Gene Family AT1G01900 54.000 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00190 - - gmx:100790006 1352.81