Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00174 ATGACAAAACAAAATAAGGAGTGGGCTATTGGAATCGATCTTGGCACTACATACTCTTGCATTGCTGTATGGAAAGAACAACAGTATAGAGTGGAAATCATTCACAACGATCAAGGCAATAGAATCACTCCTTCTTGTGTTTCTTTCACAGAAAATCAAAGGTTGATTGGCGATGCCGCTAAGAACTTGTCTTCCATTAACCCAACCAACACTGTCTTTGATGTGAAAAGGTTAATTGGCAGAAAATTCAGTGACCCCGTTATTGAGAATGATCTAAGGCTGTGGCCATTCAAGGTCATTGCTGATTCTGATGACAAACCCATGATAGTTGTTTCCTATAAGGGTAAGGAGAAACGCATTTCACCTGTAGAAATCTCATCTATGATCCTTACAAAGATGCGTGAGATTGCAGAATCATACTTGGAATCAGGGGTTAAGAATGTTGTGGTAACTGTGCCGGCTTATTTCAATGATTCTCAGCGACGAGCAACCAAAGATGCTGCTACCATTGCTGGCTTCGATGTTAAGCGGATAATCAATGAACCCACGGCTGCAGCTCTGGCTTATGGGCTTGAGAACAAAGGTAACTGTGATGGGGAGAGAAATATTTTCATCTTTGATCTTGGTGGTGGTACATTTGATGTGTCTATCCTCAGAATGAAAGATGATGTCTTTGAGGTCAAGGCAATTGCGGGTGACACTCACCTTGGAGGAGAAGACTTGGATAACAGAATGCTGAATTACTGCGTAGAGGAGTTCAAGAGAAAGAATAAAGTGGACATTAGTGCAAATCCAAAAGCCTTGAGAAGGTTGAGAACCGCTTGTGAGAGAGCAAAAAGGACACTCTCATATGCTGTTGACACCACCATTGAGGTAGATGCTTTATCTGGAGGTATTGATTTCCATTCATCAATGACTCGTACGAGATTTGAGGAACTCAACATGGACCTATTTAGAAAGTGTATGGAGACTGTAGATAGGTGTGTTGTACTGGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAACAGCTATTGCAAGACTACTTTAAGGGAAAAGATTTATGCAAGAGCATTAACCCTGATGAGGCTGTTGCACATGGAGCTGCTGTGCAGGCTGCTATATTGAGTGACGGCATTAAATATTTTCCTGAATTGGTGTTATTGGATGTTACACCGCTATCTCTTGGTATATCTGCAAACGGAGATCTCATGAGTGTTGTGATTCCTAGAAACACCATCATTCCTGTTGAAAAAAAGCGAGGATTTGTAAGATCCGCAGACTTCCAATCCTCCGTCCTAATCGAGGTTTACGAGGGTGAGAGGACAAGAGCAAGCGATAACAATTTGCTTGGGTCTTTTAGATTTTATGGAAGTCCAAATGCTCTTAGAGGCCATCCTTTAACTGTATGCTTCAGTATAGATGCTAATGGTATCCTAAGTGTAACTGCTGAGGAAAAAAGCAGCGGAAGAATAGACAGTATTATCATAACCAACGACAAGGGGAGATTATCAACTCAACAAGTTATGAGGATGATGGAAGAAGCTGAGAAATACAAGGCTGAAGATCAGGAGTACAAAAAGAAAGTTCAAGCAATTAGTGCTTTGGAAGATTTCGTTTACAAGATAAGGAAAGCTGTCGAGGATGTTGACAACATTTTTAAGCTTGATACACAAGACAAAACGAAGATCAACGTGGCAATTGCAGAGGCCAGAAAATTGCTCGGTGCCAGCAAGGAGACAGAAACAGGTGTGCTTGTGGATCATCTGCGCGAGATGAAGAGTCTCATTGAACCGATAATGAGGATTAACTAG 1812 0.4156 MTKQNKEWAIGIDLGTTYSCIAVWKEQQYRVEIIHNDQGNRITPSCVSFTENQRLIGDAAKNLSSINPTNTVFDVKRLIGRKFSDPVIENDLRLWPFKVIADSDDKPMIVVSYKGKEKRISPVEISSMILTKMREIAESYLESGVKNVVVTVPAYFNDSQRRATKDAATIAGFDVKRIINEPTAAALAYGLENKGNCDGERNIFIFDLGGGTFDVSILRMKDDVFEVKAIAGDTHLGGEDLDNRMLNYCVEEFKRKNKVDISANPKALRRLRTACERAKRTLSYAVDTTIEVDALSGGIDFHSSMTRTRFEELNMDLFRKCMETVDRCVVLVGGSSRIPKVQQLLQDYFKGKDLCKSINPDEAVAHGAAVQAAILSDGIKYFPELVLLDVTPLSLGISANGDLMSVVIPRNTIIPVEKKRGFVRSADFQSSVLIEVYEGERTRASDNNLLGSFRFYGSPNALRGHPLTVCFSIDANGILSVTAEEKSSGRIDSIIITNDKGRLSTQQVMRMMEEAEKYKAEDQEYKKKVQAISALEDFVYKIRKAVEDVDNIFKLDTQDKTKINVAIAEARKLLGASKETETGVLVDHLREMKSLIEPIMRIN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00174 603 Gene3D - 10 373 - -
Viun5g00174 603 FunFam Heat shock 70 kDa 237 320 - -
Viun5g00174 603 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Viun5g00174 603 Gene3D - 533 602 IPR029048 -
Viun5g00174 603 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 381 532 IPR029047 -
Viun5g00174 603 FunFam heat shock 70 kDa protein-like 73 128 - -
Viun5g00174 603 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Viun5g00174 603 FunFam Heat shock 70 kDa protein 380 532 - -
Viun5g00174 603 PANTHER HEAT SHOCK PROTEIN 70KDA 9 567 IPR013126 GO:0005524|GO:0140662
Viun5g00174 603 Gene3D - 194 355 - -
Viun5g00174 603 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Viun5g00174 603 Gene3D Actin; Chain A, domain 4 237 320 - -
Viun5g00174 603 FunFam Heat shock protein 70 10 201 - -
Viun5g00174 603 ProSitePatterns Heat shock hsp70 proteins family signature 3. 329 343 IPR018181 -
Viun5g00174 603 Coils Coil 508 528 - -
Viun5g00174 603 Pfam Hsp70 protein 9 598 IPR013126 GO:0005524|GO:0140662
Viun5g00174 603 Gene3D - 73 128 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 148 168 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 8 21 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 358 378 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 384 403 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 60 68 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 326 342 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 38 50 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 211 221 - -
Viun5g00174 603 PRINTS 70kDa heat shock protein signature 464 480 - -
Viun5g00174 603 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 535 IPR029047 -
Viun5g00174 603 SUPERFAMILY Actin-like ATPase domain 198 376 IPR043129 -
Viun5g00174 603 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 531 600 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00174 Viun-Chr5 1014401 1017059 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00174 1 600 Calmodulin-binding Proteins AT3G12580 62.114 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00174 K03283 - gmx:102667572 772.311