Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00170 ATGAATGACAAACCTATGATTTTTGTCAAGTACAAGGATCAGGAGAAAAAGCTTTGTGTGAAAGAAGTATCATCCATGGTCCTCTCAAAGATGTACAACATTGTAGTGATAATTGTACCTGTCTATTTCAATGATTCTCAGCGCAAAGCCACCATGGATATTGATTATATTATCAACCTGAATGTTATTCGTATAATCAATGAACCTGTCGTTGCAACAATTGTATATGGTCTTAATGAGATAAATGATTATATTGGAAAGCAAAATATTTTTCTTCACTTTGGTGGTGGTACATTCGACGTGTCTCTTCTCACTATTGAGAACAAGGTCTTTCGAGTTAAATCGACTATGGGAAACACTCACCTTGGTGGGGAGGACATTGATAATATAATGGTGAACTATGTTGTGGAGTAGATGAAAAGGAAAAGTAAATAGGGTATAAATGGGAATCTACTAGCTTTAAGTAGGTTAAAAAATGTCTGCGAGAAAGCAAAAAATTCATTGTAA 507 0.3452 MNDKPMIFVKYKDQEKKLCVKEVSSMVLSKMYNIVVIIVPVYFNDSQRKATMDIDYIINLNVIRIINEPVVATIVYGLNEINDYIGKQNIFLHFGGGTFDVSLLTIENKVFRVKSTMGNTHLGGEDIDNIMVNYVVEXMKRKSKXGINGNLLALSRLKNVCEKAKNSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00170 168 Gene3D - 27 80 - -
Viun5g00170 168 PRINTS 70kDa heat shock protein signature 97 107 - -
Viun5g00170 168 PRINTS 70kDa heat shock protein signature 35 55 - -
Viun5g00170 168 Gene3D - 2 26 - -
Viun5g00170 168 SUPERFAMILY Actin-like ATPase domain 90 167 IPR043129 -
Viun5g00170 168 PANTHER HEAT SHOCK PROTEIN 70KDA 2 168 IPR013126 GO:0005524|GO:0140662
Viun5g00170 168 FunFam Molecular chaperone DnaK 124 168 - -
Viun5g00170 168 Gene3D - 86 122 - -
Viun5g00170 168 FunFam heat shock 70 kDa protein-like 12 84 - -
Viun5g00170 168 Pfam Hsp70 protein 2 168 IPR013126 GO:0005524|GO:0140662
Viun5g00170 168 SUPERFAMILY Actin-like ATPase domain 2 79 IPR043129 -
Viun5g00170 168 Gene3D Actin; Chain A, domain 4 123 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00170 Viun-Chr5 981337 981843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00170 3 168 Calmodulin-binding Proteins AT1G56410 53.933 2.92e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00170 K03283 - vun:114185899 328.561