Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00169 ATGGCCAAAGATAAGGGAATCGCCATAGGAATCGACCTTGGTACATCCTACTCGTGTGTTGCAGTGTGGCAGGAGCAACACAATAGAGTAGAAATAATTCACAACGACCAAGGGAACAGAACTACACCTTTTTTTGTTGCTTTCACATATGATCAGAGGTTGATTGGTGAAGCTGCTAAGAATCAGGCTGCAACCAACCCAGAAAACACTGTTTTTGATGCCAAGAGGTTAATCGGAAGGAAATATAGCGATCCCATTACTCAAAGTGATAAAATGTTGTGGCCATTCAAGGTCATTGCTGATGATGATGACAAACCCTTGATTGTGGTTGAGCACAAGGACAAGAAGAAGCACCTCTCAGCTGAGGAGATATCATCCATGATCCTCATGAAGATGCGGGAGATTGCTGAGGCATATTTAGAAACGCATGTGAAGAACGCTGTTGTCACTGTACCTGCTTATTTCAACGACTCTCAACGAAAAGCTACTGTAGATGCTGGAACCATTGCTGGCCTTAATGTTATTCGGATAATCAATGAGCCTACTGCAGCGGCTATTGCATATGGGCTTGACAAGAGAACTGATTGCGTTGGAGAGCGAAACATATTCATCTTCGACCTTGGTGGTGGTACTTTTGACGTTTCTCTCCTTACAATTAAAGATAAGGTCTTCTGTGTGAAGGCTACTGCAGGAAATACTCACCTTGGGGGAGAGGACTTCAACAACAGAATGGTGAAGTACTTTGTAAATGAGTTCAAGAGAAAGAAGAAGGTGGACATTAGTGGTAACCCTAGAGCTTTAAGAAGGCTGAGAACGGCCTGCGACAAGGCAAAAAGGACACTCTCGTTTGCAGTTACTGCTTACATTGAGGTTGATTCTTTATTTGAAGGCATTGATTTCTGCTCTTCGATCAACCGAGCAAAGTTTGAGGAACTCAACATGGATCTTTTTGAGGAATGTCTGAATACTGTACAGAAATGTTTTACGGATGCTAAAATGAACAAAAGAAGTGTGCATGATGTTGTTGTCGTTGGAGGTTCTTCTAGGATTCCTAAAATACAACAGCTGTTACAGGACTTCTTCGAAGGGAAGGATTTGTGTAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCCGCAGTTCAGGGTGCTATGTTGAGTGAAGGTATCAAGAATGTTCCGAATTTGGTTTTGTTGGATGTTACCCCGCTGTCTCTTGGTATATCAACAAAGGGAGATCTCACGAGTGTTGTTATTCCTAGGAATACTGTTATTCCAGTTAAGAAGACCCAAATATATCATACAGCAGAAGATAACCAATTCTCTGCGTACATTGAGGTTTATGAAGGTGAGAGAACCGGTGCAAGTGACAACAATTTGTTAGGTTTCTTCACTCTTTCTGGGTTGTCTCCTGCTCCTCGTGGCCATCCTTTGGATGTTTGCTTTACCATAGATGCAAATGGCACCCTGTCTGTTTCTGCTGAGGATCCAAGCGCAGGTTATAAGAATGAGATTACCATAACTAATGATCAAAACAGACTTTCAGCAGGAGAAATTAAAAGAATGATTCAGGAAGCTGAAAATTACCAAGCTGAAGATAGAAAATTCATGAAGAAGGCCAATGCAAAAAATGCTTTGGATGACTTCGTTTACAAGATGAAGAATGCATTGAAGAACAGAAATATCAGTTCAAAACTTTGTGCACAAGATAGGGAGAAAATCAACTATGCAGTTAAGAATGCTGCAAAGTTGCTTGATGAAGATAACCAACAGCATGGAATAGAGTTGATTGAGGATAATCTGAATGAGGATAATCGTTTAGATGAATACAAACTTGCTTCTAATTGTTATTATCTGAACAATGTTTAA 1872 0.4087 MAKDKGIAIGIDLGTSYSCVAVWQEQHNRVEIIHNDQGNRTTPFFVAFTYDQRLIGEAAKNQAATNPENTVFDAKRLIGRKYSDPITQSDKMLWPFKVIADDDDKPLIVVEHKDKKKHLSAEEISSMILMKMREIAEAYLETHVKNAVVTVPAYFNDSQRKATVDAGTIAGLNVIRIINEPTAAAIAYGLDKRTDCVGERNIFIFDLGGGTFDVSLLTIKDKVFCVKATAGNTHLGGEDFNNRMVKYFVNEFKRKKKVDISGNPRALRRLRTACDKAKRTLSFAVTAYIEVDSLFEGIDFCSSINRAKFEELNMDLFEECLNTVQKCFTDAKMNKRSVHDVVVVGGSSRIPKIQQLLQDFFEGKDLCKSINPDEAVAYGAAVQGAMLSEGIKNVPNLVLLDVTPLSLGISTKGDLTSVVIPRNTVIPVKKTQIYHTAEDNQFSAYIEVYEGERTGASDNNLLGFFTLSGLSPAPRGHPLDVCFTIDANGTLSVSAEDPSAGYKNEITITNDQNRLSAGEIKRMIQEAENYQAEDRKFMKKANAKNALDDFVYKMKNALKNRNISSKLCAQDREKINYAVKNAAKLLDEDNQQHGIELIEDNLNEDNRLDEYKLASNCYYLNNV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00169 623 Gene3D - 193 367 - -
Viun5g00169 623 FunFam heat shock 70 kDa protein-like 72 127 - -
Viun5g00169 623 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Viun5g00169 623 Pfam Hsp70 protein 8 593 IPR013126 GO:0005524|GO:0140662
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 370 390 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 338 354 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 59 67 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 476 492 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 396 415 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 7 20 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 210 220 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 37 49 - -
Viun5g00169 623 PRINTS 70kDa heat shock protein signature 147 167 - -
Viun5g00169 623 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Viun5g00169 623 FunFam Heat shock protein 70 9 200 - -
Viun5g00169 623 Gene3D - 9 385 - -
Viun5g00169 623 PANTHER HEAT SHOCK PROTEIN 70KDA 8 580 IPR013126 GO:0005524|GO:0140662
Viun5g00169 623 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Viun5g00169 623 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 544 IPR029047 -
Viun5g00169 623 FunFam Heat shock 70 kDa protein 390 544 - -
Viun5g00169 623 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Viun5g00169 623 FunFam Heat shock 70 kDa 236 319 - -
Viun5g00169 623 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 604 IPR029048 -
Viun5g00169 623 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Viun5g00169 623 Gene3D - 72 127 - -
Viun5g00169 623 Gene3D Actin; Chain A, domain 4 236 319 - -
Viun5g00169 623 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 548 IPR029047 -
Viun5g00169 623 Gene3D - 545 608 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00169 Viun-Chr5 972688 975582 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00169 2 604 Calmodulin-binding Proteins AT3G12580 67.273 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00169 K03283 - gmx:102667578 912.909