Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00102 ATGAATGATTCCACGGCGAAGAATTTGGCCATCACGGAGAGGAAGGTGCAGCAGAAACCGGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAACTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCTGCTCGTGCGAAAAAGTTCAAGGGGGATGAAAAGATGCCAAATTCCAAGATTCACTTGATTGCTAATGAGAACAGTGGAGGTTTCCCAAGTGCTAATAAAAAAGGTGGGAATCATGGCGTAGATGTAGAGCAGAAGAGTGAAATGCGAGTTCCGAGTCTGGTAGCCAGGTTGATGGGTCTAGAATCTATTCCGACCGCTCAGCGAGATAAGTCCAAGAAAGCGTTGTGTGCTGATGAGAAGAACGAGTCTTTGGGTGGTGAGCATTGTGAGTTGGAGAGGCAAGGCATGGGTTTGGAAATGGGAGTTGTGAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGGTCCTATGAGAGAAGGGCAGTGACTAGATTTGGAGCTGAGGCTTTCCAAATTAAGAATGTATTATCACGAGGAAGAAAGTATCATCACCATCATCATCATCATCCGAAGCTTGCTTCTTCTTTGAAGAGCCCGAGAATTCCTTCCGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAGCCTGGACTGCAAAGCAGAAGTAGGGCCAAAGGTTCTCTTACATACACTGCTTCCATGTACCCTCCCAAGACTGGTATTATGACCAATGATGTGCAAAATCAATCTTGTTATGAAGCTGGCTCTTGCAAGCAATTGATGGAGCAGACCTCTTGCAAAAACTGTGGTAATCTGCTAGATGTAGTTGACTGCAGGCTTGAGGTTGGGGGAGAGCCACTGGATCCTCCACCCGTTGTTTCAGATGTGATCACAGCTACCTCTATGGAATCATCAGAGAAGAAGGGAAAGTCATTCACTTCCCTTGGACATGACAGAGATGTAGTTCTTCTGAGAAGCCAAGAAAAGTTCATTTCTCTTGATACTGAAGAGAAGGGGAAAAATAATGCACATAAATCATGGAATGAGCCCACTGTTAGAAGATTGTCAATGCCCCATGATTGTCTACCTAAATGGAATTCATCTTGCCAACCATCAAGGACCCTGGAGGATGATGCATCTTCTTTTCGCCCAAAACACAAAACTCAAACACAAGAACAGATGTTAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGCGATATGCAAGTAAAAGGGGTGTCATCATCTACGAGTGATATGAATGGTGCTAAAGACTTTGTTTCTATGAATAGAAGTCTTACTGGTCGAACAAGGACAAGATCACCAACCAAAGCTGATAGTTCTAGATTTGACCTAGAGAGAAAACCGTACAGTCGACAGCATAATTCTTTGTCTCACGTAAGAACATTAGAGAGAAAAAGAAGGATCCCACATGCCACTCAACTAGAAGGCACAGGTTCTGTTTATTCAGTTGGTGCAAAACAGAGAAATCTCCATTCTAATGGATTGGGTGGCAAAAGGAGGGACTCCAGTGCTTCTTCCTTGAACAATTCTATTATAAAAAATAAACAAGTTGCTCAAGGAGAACGAGTTATTAAGGTTAAGGACAACAAGATCAATGATGTAGTGTCATTTACATTTAATTCCCCCCTGAAGCAAAAGATAGGAATAACTGCCGAGAGGGAAGAGACAAGCACTGACAATGAGAGTATTAAAAGGCCTAAACCCTTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTGACCTCTCAAAGGGACGAAGAATTGGCTACAGGTGTTCCGCCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTTTAAGTTCAGAGCATTTGATCTGTCATGATGGTCATCATGTGTTTAATGAAAATGTTGGTTTGCATTATGGGGAAAAACAAGAAAGGTTATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCTGATTCCATGAATCACTCATGTTGTGGTCAACTAGAACATGATACCGAACTTTCAGATTCTGCAACATCCTTTACCAAAGGGAAGATAGGTGAGATACTGAGTGATCTTGTCAGCCAACTTCCCAGGGCATTGGAAAGTTTGCACACTTATGGGACAGAATTAACAATAAGCAAGCTTAACCATGTGAAGGATATTCTCTTGCATGCTGAGTTGGTGCTTGGAATTACAACTGATCGCAGACAGGATGAAGGGCCACAACTCATAATTCATCGGTTTCTCGTTGATGATCTTGAGAGCATGACTAGTGATACCATGTGGACAGATTTGAGTTGTGATGATTCTAAACAGAGAAAGGAACTGAAGGGTTTTCTCCTTGATTGTGTTGTGGAATATCTAGAATCAAACTGCAGCCTTTATTTTAACTCTGGATTCAGGGCATGGACAAAGTTACCCTTATGCATGAGAGCTGAGATGTTGGCTAAAGAGGTGAAGAGGGAGATCAACAAGTGGTTATCTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACTGACTTTGGTATTGAAGCATGTGAGGCTGGTGTTGATATAGATGGGGACATACTTCAGATTTTGGTTGATGAAGTTGTTGAAGACCTTGTAGGTTCCACTCATGGCTCCATCACCTTCTAA 2817 0.4242 MNDSTAKNLAITERKVQQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKIHLIANENSGGFPSANKKGGNHGVDVEQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCADEKNESLGGEHCELERQGMGLEMGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIKNVLSRGRKYHHHHHHHPKLASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKGSLTYTASMYPPKTGIMTNDVQNQSCYEAGSCKQLMEQTSCKNCGNLLDVVDCRLEVGGEPLDPPPVVSDVITATSMESSEKKGKSFTSLGHDRDVVLLRSQEKFISLDTEEKGKNNAHKSWNEPTVRRLSMPHDCLPKWNSSCQPSRTLEDDASSFRPKHKTQTQEQMLSSERYSSGSTMSDMQVKGVSSSTSDMNGAKDFVSMNRSLTGRTRTRSPTKADSSRFDLERKPYSRQHNSLSHVRTLERKRRIPHATQLEGTGSVYSVGAKQRNLHSNGLGGKRRDSSASSLNNSIIKNKQVAQGERVIKVKDNKINDVVSFTFNSPLKQKIGITAEREETSTDNESIKRPKPLRVDALGAFLEQKLKELTSQRDEELATGVPPKKSSAMILQELISALSSEHLICHDGHHVFNENVGLHYGEKQERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNHSCCGQLEHDTELSDSATSFTKGKIGEILSDLVSQLPRALESLHTYGTELTISKLNHVKDILLHAELVLGITTDRRQDEGPQLIIHRFLVDDLESMTSDTMWTDLSCDDSKQRKELKGFLLDCVVEYLESNCSLYFNSGFRAWTKLPLCMRAEMLAKEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFGIEACEAGVDIDGDILQILVDEVVEDLVGSTHGSITF 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00102 938 MobiDBLite consensus disorder prediction 190 226 - -
Viun5g00102 938 MobiDBLite consensus disorder prediction 461 487 - -
Viun5g00102 938 MobiDBLite consensus disorder prediction 404 460 - -
Viun5g00102 938 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 927 - -
Viun5g00102 938 MobiDBLite consensus disorder prediction 210 224 - -
Viun5g00102 938 MobiDBLite consensus disorder prediction 387 487 - -
Viun5g00102 938 MobiDBLite consensus disorder prediction 190 205 - -
Viun5g00102 938 Pfam DUF761-associated sequence motif 93 119 IPR032795 -
Viun5g00102 938 MobiDBLite consensus disorder prediction 515 535 - -
Viun5g00102 938 Pfam Domain of unknown function (DUF4378) 764 923 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00102 Viun-Chr5 645991 650539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00102 1 928 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.952 5.94e-83 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00102 - - gmx:100813026 1483.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00102 5 645991 650539 Viun5g00102 5 645991 650539 ECH