Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00085 ATGGCTATGGTGGTCCTCACACCCCTTTTGCTCATACTCCCTTTTCTCCTACTTAAACTCCTCTACGACAACCTCTCATGCTACTGGTTCACCCCTCTACGCATAAAAAAGATCATGGAGATGCAAGGTGTCCGTGGCCCCAAACCTAGTTCCTTCACCGGCAACATCCTAGACATGGCTTCCCTTGTCTCCAAAACAACCTCCCAAGACATGAAAACCATAAGCCACGACATTGTTGGTCGTCTTCTCCCACATTTCTTGCTTTGGTCTAGCCAATTTGGAAAGAGGTTTCTGTATTGGAATGGAACAGAACCGAGGCTGTGTCTCACCGAGACCGAATTGATCAAAGAGTTCCTTTCAAAATACAGTACGGTATCTGGGAAATCCTGGCAGCAAAGACAGGGTTCAAAGAATTTCATTGGGCAAGGACTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGAGACAGACTTAAGAGCTATGCTGGGCACATGGTGGAATGCACTAAGGAGATGCTCCAATCGCTGAAAATTGCGTTGGAGTGTGGCCAAACCGAGGTGGAGATTGGTCACTACATGACTAAACTCACTGCAGATATTATCTCTAGGACCGAGTTTGGTACGAGTTATCAGAAAGGGAAGAAAATATTCCACCTCCTCACACTGCTGCAGAGTCGTTGTGCTCAAGCAAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTTTTTCCCAAGCAAGTATAACAGAGAGATAAAGTGTTTGAAGATGGAGGTGGAGACTCTGCTGATGGAGATCATACAAAGCAGAAAAGACTGTGTGGAGATTGGAAGAAGCAACTCTTATGGGAATGATTTGTTGGGGATGCTCCTCAACGAGATGCAGAAGAAAAAAGGGAATGGAAACAGCATCAATCTGCAGCTAGTGATGGATCAATGCAAAACATTTTTCTTTGCCGGACACGAAACCACTGCACTTTTACTCACTTGGACAGTTATGTTACTCGCCAGCAACACATCATGGCAGGACAAAGTCCGAGAAGAGGTTAAAAATGTCTGCAATGGTGAAATCCCTTCTTTGGATCAACTCTCCAAACTCACTCTTTTGCACATGGTGATCAACGAATCACTGAGGTTGTATCCTCCGGCATCGGTGCTTCCGAGGATGGTGTTTGAAGACATAGTACTAGGTGACCTTTACATTCCTAAGGGCTTGTCGATTTGGATTCCGGTGTTGGCCATTCATCACAGTGAAAAGCTATGGGGCAAAGATGCAAACGAGTTCAACCCAGAGAGGTTCAGTTCGAAGTCATTTGTTCCTGGTCGTTTTCTACCGTTTGCTTCTGGGCCCAGAAATTGCGTGGGACAAGCCTTCGCATTAATGGAAGCTAAGATGATATTAGCCATGTTGATTTCCCGGTTCAGCTTCACCATTTCTGAAAATTACCGTCATGCCCCTGTGGTTGTTCTCACCATCAAGCCCAAATATGGGGTTCAGGTTTGTTTGAAGCCCTTGGAGGCATGA 1548 0.4599 MAMVVLTPLLLILPFLLLKLLYDNLSCYWFTPLRIKKIMEMQGVRGPKPSSFTGNILDMASLVSKTTSQDMKTISHDIVGRLLPHFLLWSSQFGKRFLYWNGTEPRLCLTETELIKEFLSKYSTVSGKSWQQRQGSKNFIGQGLLMANGEDWYHQRHIVAPAFMGDRLKSYAGHMVECTKEMLQSLKIALECGQTEVEIGHYMTKLTADIISRTEFGTSYQKGKKIFHLLTLLQSRCAQASRHLCFPGSRFFPSKYNREIKCLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQKKKGNGNSINLQLVMDQCKTFFFAGHETTALLLTWTVMLLASNTSWQDKVREEVKNVCNGEIPSLDQLSKLTLLHMVINESLRLYPPASVLPRMVFEDIVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFSSKSFVPGRFLPFASGPRNCVGQAFALMEAKMILAMLISRFSFTISENYRHAPVVVLTIKPKYGVQVCLKPLEA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00085 515 Pfam Cytochrome P450 92 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 CDD CYP72_clan 83 507 - -
Viun5g00085 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 505 - -
Viun5g00085 515 SUPERFAMILY Cytochrome P450 77 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g00085 515 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00085 Viun-Chr5 520860 524283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00085 1 375 Cytochrome P450 AT5G38450 66.667 5.16e-170 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00085 K10717 - gmx:100808392 964.14