Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00081 ATGGCTTCTTTCACTATTTCCCCTGCTTCACTGGTTGGGAAGAAGAAGGTTTTGTTCATAATGGGTGCAACTGGAACAGGTAAGACCAAACTCTCCATCAATTTGGCCATGCAATTTCCCTCTGAAATCATCAACTCTGACAAAATCCAAGTCTACAAGGGTCTCGACATCATCACCAACAAGGTTTCTGAGTCTGAACGTTATGGCATTCCCCATCACCTTCTTGCCATCATCGACGATCCTGATTATGACTTCACCGTTGATGACTTCTGCAACCATGTCCTTCTCGCTCTTGATACCATCATTCAAAATGGACACCTACCCATTATCGTGGGTGGCTCAAACACTTACCTCGCAGCCATGCTCGAGGATCCTAACATTGGTTTTCGTTCTAAATATGATTGTTGTTTCATCTGGGTCGACGTGTCTTTACCAGTGTTGTTTCCGTATCTGGACAAAAGGGTGGACGAAATGGTTGATGCAGGAGTTGTGGATGAGATTCGAGAAGCTTTTGTTGCTGGAGCAGATTGCAGCCGTGGGATTAGAAGAGCCATTGGGGTTCCTGAGCTTGGAGAGTTTTTCCTTGTGGAGAAGGAAATAGACGACGAAACTCAGAAGGAGAAGATGCTGCAACATGCTATTATGAAAACCAAAGAGAACACTCGTAAGTTGGCTGAGAAACAACTCTCGAAGATCCGAAAGATGAACCATGAATTGAAAATGTTTAGGTTTGATTCCACACAAGTTTTTGAGGCTGTTCTAAAAGGAGTGGATTATAAGCAATTGTACGCAGAGCTTGTGTTCATACCAAGCATAGAGATAGTTAAACAATTTCTTGAGGAGACAACTGCTGTGAAAAAGACATCATCTCAAAATGCTGAACAAGTCCCGATTTGTGTTTAA 903 0.4286 MASFTISPASLVGKKKVLFIMGATGTGKTKLSINLAMQFPSEIINSDKIQVYKGLDIITNKVSESERYGIPHHLLAIIDDPDYDFTVDDFCNHVLLALDTIIQNGHLPIIVGGSNTYLAAMLEDPNIGFRSKYDCCFIWVDVSLPVLFPYLDKRVDEMVDAGVVDEIREAFVAGADCSRGIRRAIGVPELGEFFLVEKEIDDETQKEKMLQHAIMKTKENTRKLAEKQLSKIRKMNHELKMFRFDSTQVFEAVLKGVDYKQLYAELVFIPSIEIVKQFLEETTAVKKTSSQNAEQVPICV 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00081 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 173 IPR027417 -
Viun5g00081 300 Gene3D - 14 279 IPR027417 -
Viun5g00081 300 FunFam Adenylate isopentenyltransferase 5, chloroplastic 144 242 - -
Viun5g00081 300 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 14 278 IPR039657 -
Viun5g00081 300 Pfam IPP transferase 131 234 - -
Viun5g00081 300 Pfam IPP transferase 50 124 - -
Viun5g00081 300 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 241 - -
Viun5g00081 300 Coils Coil 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00081 Viun-Chr5 486831 487929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00081 131 295 C2H2 Transcription Factor Family AT2G27760 30.256 2.12e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00081 K10760 - gmx:121173984 465.307