Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00069 ATGGCTACCATTTCACTCAGGCACAACCCTGAAGTGAACAACACTAACCAGCAACGTGAAATCATCGCCGAAGAGATTCAAGGACTCATCAGAGTCCACAGAGATGGACGTGTAGAGAGGCCACAAATTGTGCCCAGTGTCTCCTGCACAGAACGTGCCAAAGATGTTGTTATCATCAACAGAGAGACCAACTTGAGGGCACGTGTTTATGTGCCTTCAACGAGTTCTCACACAACAAAGCCTCTTCCTTTGGTTATGTACTTCCACGGTGGTGGATTCTGTGTCGGTTCTGCTGCTTGGAGCTGTTACCATGAGTTCTTGACCAACCTCGCTTCCAAAGCAAACTGTGTCGTTCTCTCTGTGGATTATCGCCTAGCCCCAGAGAACCGTCTTCCTATTGCATACGATGACGGTTTCAACGCTCTCGCGTGGGTGAAAAGAGAAGCACTGAACATCTCCGCCGCGCAAAAATGGTGGCTGAGTCACTGCGACATGTCTTCCGTTTTCCTCGCCGGTGACAGTGCAGGTGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCATCATCAAACACCACGACACCGTTGTCTCTCAAGGGTGTCATACTGATCCAACCTTTCTTCGGAGGAGAAGAAAGAACTAGCTCCGAGAAGCACTTCCTTCAGCCACCCCACTCAGCGCTCACTTTATCCGTTTCCGACACTTATTGGCGCTTGGCGCTTCCTCTTGGAGCCACTCGTGACCACCCATATTGCAACCCTCTTGCGTATGGCACGGTGAAATTGAGAGATTTGAGGATTTCTTCCATTATGGTGTGCGTTTCAGAAATGGATATACTGAGAGATAGGAACTTGGAGTTCGCAAAAGCTTTGGGTAAAGCAGGGAAAAGGGTTGAAACAATTGTTTTCAAAGGCGTAGGCCATGCCTTCCAAGTTCTGCATAATTACCAGCTTTCACATTCCCGAACCCAAGAAATGATAGCTCATATCAGAAACTTTGTTAACCAGTGA 1023 0.4819 MATISLRHNPEVNNTNQQREIIAEEIQGLIRVHRDGRVERPQIVPSVSCTERAKDVVIINRETNLRARVYVPSTSSHTTKPLPLVMYFHGGGFCVGSAAWSCYHEFLTNLASKANCVVLSVDYRLAPENRLPIAYDDGFNALAWVKREALNISAAQKWWLSHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSSNTTTPLSLKGVILIQPFFGGEERTSSEKHFLQPPHSALTLSVSDTYWRLALPLGATRDHPYCNPLAYGTVKLRDLRISSIMVCVSEMDILRDRNLEFAKALGKAGKRVETIVFKGVGHAFQVLHNYQLSHSRTQEMIAHIRNFVNQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00069 340 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 168 180 IPR033140 -
Viun5g00069 340 Gene3D alpha/beta hydrolase 27 340 IPR029058 -
Viun5g00069 340 SUPERFAMILY alpha/beta-Hydrolases 24 340 IPR029058 -
Viun5g00069 340 PANTHER ARYLACETAMIDE DEACETYLASE 26 319 - -
Viun5g00069 340 Pfam alpha/beta hydrolase fold 85 315 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00069 Viun-Chr5 419702 421472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00069 1 339 Carbohydrate Esterase AT5G16080 51.289 6.08e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00069 - - gmx:100819429 561.607