Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00017 ATGAGTGAAGTGGATGATGGGATGGTGGTGAAAAAGAAGGTGGGAAAAGGGCTGATCACCAAAACGTGGGAGCGATGCAAGTGGATAGGACGAGGCAGAAGCAGCGTGATGATGATGAGGAGCAGATCCTGGCCCAGCCGCAAGGGACCAAAGAAGAACAGCAGCAACGTTGGTGTGGCACCCGAAGGTTGCTTCTCCGTCTACGTCGGACCACAAATGCAGAGGTTCGTGATCAAGACCGAGTACGCTAATCATCCTTTGTTCAAGATTCTCCTGGAAGAAGCAGAATCCGAGTATGGGTACAGCAGCCAAGGTCCTTTGGCTCTTCCCTGCCACGTTGATATCTTCTACAAGGTGTTGATGGAAATGGAGTATTCTAAAGAAGAAGAAGAAGAGGAGCAACAGAAACTAACTCGTAAAGCTTCTGCTGGTTGTGTCTGTCTTAACCGCTCTCCCTCCGCTTATCGTCTTCTTCGTTCTTCCTCCGTCAAACCATAA 498 0.494 MSEVDDGMVVKKKVGKGLITKTWERCKWIGRGRSSVMMMRSRSWPSRKGPKKNSSNVGVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKILLEEAESEYGYSSQGPLALPCHVDIFYKVLMEMEYSKEEEEEEQQKLTRKASAGCVCLNRSPSAYRLLRSSSVKP 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00017 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 48 120 IPR003676 GO:0009733
Viun5g00017 165 Pfam Auxin responsive protein 41 120 IPR003676 GO:0009733
Viun5g00017 165 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00017 Viun-Chr5 119425 120353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00017 61 126 Calmodulin-binding Proteins AT5G20810 48.485 2.35e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00017 K14488 - gmx:100777217 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00017 5 119425 120353 Viun5g00017 5 119425 120353 ECH