Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g00013 | ATGGAGAAACTCAATTTTCTGAAGAATGGGGAGCTCAGATTGCCTCCGGGCTTCCGTTTCCACCCAACGGACGAGGAATTGGTTATGCAATACTTAAAGCGCAAGGTCTTCTCCTGCCCTTTGCCAGCCTCCGTCATTCCTGAGTTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTAGAGAAAGAGAGGTACTTCTTCAGCACCAAAGAGCCCAAATATCCCAACGGCAACCGTTCCAACAGAGCCACCAGTTCAGGTTACTGGAAGGCCACTGGGTTGGACAAACAAATTTTAACTTCAAAAGGGAACCAAGTAGTGGGAATGAAGAAGACACTTGTTTTCTACAGAGGAAAGCCGCCTCATGGATCCAGAACTGATTGGATCATGCACGAGTATCGCCTCCTTAACTCTCCGTCTCAGGCTCCCATGGAAAACTGGGTTCTGTGTCGCATATTTTTGAAGAGGAGAAGTGGTGGGAGAAACGGGGAGGAGAAGGAGATGGAGAGTTTGAGAGGCGGAGTGGAGAATCGGAAGGTGAGGAAGTCGAAGATGGTTTTCTATAACTTTTTGGCGCAGAGAAAAACCGATTCCTCGTCTTCTGCCGGCAGTGGAATTACCCATGAATCAGATGAGCATGAAGAGAGCAGTAGCTCCGACACCTTCCCTTATTTTAGAACAAAACCTTGA | 699 | 0.4764 | MEKLNFLKNGELRLPPGFRFHPTDEELVMQYLKRKVFSCPLPASVIPEFDVCKSDPWDLPGDLEKERYFFSTKEPKYPNGNRSNRATSSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLNSPSQAPMENWVLCRIFLKRRSGGRNGEEKEMESLRGGVENRKVRKSKMVFYNFLAQRKTDSSSSAGSGITHESDEHEESSSSDTFPYFRTKP | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g00013 | 232 | ProSiteProfiles | NAC domain profile. | 14 | 158 | IPR003441 | GO:0003677|GO:0006355 | |
Viun5g00013 | 232 | Gene3D | NAC domain | 23 | 162 | IPR036093 | GO:0003677|GO:0006355 | |
Viun5g00013 | 232 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 13 | 200 | - | - | |
Viun5g00013 | 232 | Pfam | No apical meristem (NAM) protein | 15 | 138 | IPR003441 | GO:0003677|GO:0006355 | |
Viun5g00013 | 232 | MobiDBLite | consensus disorder prediction | 198 | 232 | - | - | |
Viun5g00013 | 232 | SUPERFAMILY | NAC domain | 10 | 158 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g00013 | Viun-Chr5 | 97829 | 99159 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g00013 | 1 | 225 | NAC Transcription Factor Family | AT5G13180 | 58.964 | 3.43e-99 | 287 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Viun5g00013 | NAM | 2e-35 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g00013 | - | - | var:108321729 | 432.18 |