Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02829 ATGTGCAGCTACGGCGGCCACATACTCCCCCGTCCCGGCACCAACTCCCTCTTCTACGCCGGCGGCGAAACCCGCATCCTCTCCATCCACCGCCGCACCCTCGCCACGCTCTCCTCCTTCCGCACCCATCTCTCCACCCTCCTCTCTCTCAAATACCCCTTCACTCTCAAGTACCAGCTCCCCCACCTCCACCTCGACTCCCTCATCACCCTCGCCTCCGACGAAGACCTCCACATCCTCGTCGACGAGCACCACCGCTCCTCCTCCCGCATCAGACTCTTCGTCTTCCCCGCTTTCCGCCACCCCAAAAGTGAGTCATGGTTCTTGGACGCCCTCAAGTGCTCCTCCATCATGCACCACTCCTTCCCTCTCGACGCCACCTCTTCCTCCGTCACCCCTCCCCTCCATCACCACCCCTCTTCTCTTCCAAGTGATAGTACTGTTTCCAGCATCATTTCGCAGCGGCACAATATATGTTATCAGGACCCTGTTCAAGTTGAAACTCAAATCCCCTTTGTTTCCAATAATGCAAATGTGAATGCACTGTATTCTTCATTTCCACGCTTTAATCCACTGCTGCAATCTGCTACACGCAATTTACCTCTTCACCATATTTACCAGCAACCTCGTCCTTCCACGCATCTGCTTTATCAAACCAATCCTGTTTGCCCCGTATACCTCGTACCTGTTACTCTGCCTATGACAGCCTCCACTCAACCATCAATGAATCTAAATGTTTCATCTTTAGGTTTCCATGTACCACATAACTATACCTCTAACTCTCACAACTACTTAACACACACACAAACTGCACCACTCGTTCATCATCATCAACCTCAATCTCAGAATATATCTATTACTTCCGTGGAATCTCCCGAGAGTGGGAATGAACTTCACAACAACCTTGCTCGTGATCAGATATACAAATCTCAGCCCCCACCTCCGGCATTGCCTTCTAAACACCAAACCTTGAGAAAAGACACGGCGGAGTTGTTGTCTGAAGCTCTTTCTCAGTTGCATGTGGATAGCCGCAGCAGATAG 1041 0.512 MCSYGGHILPRPGTNSLFYAGGETRILSIHRRTLATLSSFRTHLSTLLSLKYPFTLKYQLPHLHLDSLITLASDEDLHILVDEHHRSSSRIRLFVFPAFRHPKSESWFLDALKCSSIMHHSFPLDATSSSVTPPLHHHPSSLPSDSTVSSIISQRHNICYQDPVQVETQIPFVSNNANVNALYSSFPRFNPLLQSATRNLPLHHIYQQPRPSTHLLYQTNPVCPVYLVPVTLPMTASTQPSMNLNVSSLGFHVPHNYTSNSHNYLTHTQTAPLVHHHQPQSQNISITSVESPESGNELHNNLARDQIYKSQPPPPALPSKHQTLRKDTAELLSEALSQLHVDSRSR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02829 346 PANTHER OS05G0427100 PROTEIN-RELATED 1 279 - -
Viun4g02829 346 Pfam PB1 domain 18 97 IPR000270 GO:0005515
Viun4g02829 346 SMART PB1_new 12 98 IPR000270 GO:0005515
Viun4g02829 346 CDD PB1_UP2 1 96 - -
Viun4g02829 346 SUPERFAMILY CAD & PB1 domains 15 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02829 Viun-Chr4 42493607 42495385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02829 1 98 MAP Kinase Kinase Kinase AT1G04700 43.689 1.55e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02829 - - vun:114180326 679.863