Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02828 ATGGACTCTGCAGAATCCACCGCCAAGCTCCGTCTCATGTGCAGCTACGGCGGCCACATACTCCCCCGTCCCGGCACCAACTCCCTCTTCTACGCCGGCGGCGAAACCCGCATCCTCTCCATCCACCGCCGCACCCTCGCCACGCTCTCCTCCTTCCGCACCCATCTCTCCACCCTCCTCTCTCTCAAATACCCCTTCACTCTCAAGTACCAGCTCCCCCACCTCCACCTCGACTCCCTCATCACCCTCGCCTCCGACGAAGACCTCCACATCCTCGTCGACGAGCACCACCGCTCCTCCTCCCGCATCAGACTCTTCGTCTTCCCCGCTTTCCGCCACCCCAAAAGTGAGTCATGGTTCTTGGACGCCCTCAAGTGCTCCTCCATCATGCACCACTCCTTCCCTCTCGACGCCACCTCTTCCTCCGTCACCCCTCCCCTCCATCACCACCCCTCTTCTCTTCCAAGTGATAGTACTGTTTCCAGCATCATTTCGCAGCGGCACAATATATGTTATCAGGACCCTGTTCAAGTTGAAACTCAAATCCCCTTTGTTTCCAATAATGCAAATGTGAATGCACTGTATTCTTCATTTCCACGCTTTAATCCACTGCTGCAATCTGCTACACGCAATTTACCTCTTCACCATATTTACCAGCAACCTCGTCCTTCCACGCATCTGCTTTATCAAACCAATCCTGTTTGCCCCGTATACCTCGTACCTGTTACTCTGCCTATGACAGCCTCCACTCAACCATCAATGAATCTAAATGTTTCATCTTTAGGTTTCCATGTACCACATAACTATACCTCTAACTCTCACAACTACTTAACACACACACAAACTGCACCACTCGTTCATCATCATCAACCTCAATCTCAGAATATATCTATTACTTCCGTGGAATCTCCCGAGAGTGGGAATGAACTTCACAACAACCTTGCTCGTGATCAGATATACAAATCTCAGCCCCCACCTCCGGCATTGCCTTCTAAACACCAAACCTTGAGAAAAGACACGGCGGAGTTGTTGTCTGAAGCTCTTTCTCAGTTGCATGTGGATAGCCGCAGCAGATAG 1077 0.5144 MDSAESTAKLRLMCSYGGHILPRPGTNSLFYAGGETRILSIHRRTLATLSSFRTHLSTLLSLKYPFTLKYQLPHLHLDSLITLASDEDLHILVDEHHRSSSRIRLFVFPAFRHPKSESWFLDALKCSSIMHHSFPLDATSSSVTPPLHHHPSSLPSDSTVSSIISQRHNICYQDPVQVETQIPFVSNNANVNALYSSFPRFNPLLQSATRNLPLHHIYQQPRPSTHLLYQTNPVCPVYLVPVTLPMTASTQPSMNLNVSSLGFHVPHNYTSNSHNYLTHTQTAPLVHHHQPQSQNISITSVESPESGNELHNNLARDQIYKSQPPPPALPSKHQTLRKDTAELLSEALSQLHVDSRSR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02828 358 Pfam PB1 domain 30 109 IPR000270 GO:0005515
Viun4g02828 358 SUPERFAMILY CAD & PB1 domains 27 110 - -
Viun4g02828 358 CDD PB1_UP2 13 108 - -
Viun4g02828 358 PANTHER OS05G0427100 PROTEIN-RELATED 8 291 - -
Viun4g02828 358 SMART PB1_new 24 110 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02828 Viun-Chr4 42493606 42495115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02828 3 108 MAP Kinase Kinase Kinase AT1G79570 38.393 2.52e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02828 - - vun:114180326 701.049