Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02808 ATGGCATTCTTATTGGTCGGTTATGCAGCAGCAACAATTGCAGCACTCTTCTGCATTTATCTCAGAAGATGTTGCACGCACCCCATCTTCACTGAATACCCTTTTGTTGGGATGCTACCACAAGTTCTTTGCAATTTGTGGCGTGCCCATGATTATTCAACTCAGGTTTTGAAGCAACACGGTGGCACTGGTGAGTTCACTGGGCCATGGTTCACCAGTATGAACTACATGCTCACCTGCGATCCCTTCAACGTGCATCACATGTTGAGCAGAAATTTTCACAACTACGTCAAGGGACCCGAGTTTCGTGAGATTTTTCAGGCTTTCGGAGATGGCATTTTCACTGCTGATGCAGAAGCTTGGAAATATGACAGAGATCTCTTCCATTCCTTGTTCAAGCATAAAAGCTTCGAGGTGTTTCTGGAGAAAACCATTCAGAAGAAGGTGAAGAATAGCTTGCTTCCTTTGTTGAATCATCACGCGCAAGGGAGGGTGGTGGTGGATCTTCAAGATGTCTTCAATCGCTTCACTTTTGATAACATATGTTCTACTGTTCTTGGTCGTGACCCTGAATGCCTTTCCATTGATTTCCCAGAAGTTGCAATCGAGAAGGCTTTTAACCAAGCGGAAGAGTGCATATTCTACAGGCACATAGTGCCAAAGTTTGTTTGGAAGATGCAGCAATGGCTTCAGATTGGTCAAGAGAAGAAGATGACAGAAGCATGTAAAACGCTTGATGAGTTCATATATTCATGCATAGCGTCCAAGAGAGAAGATCTAAGAAGGTACGAGGAAAATGAAAATGAAGAAACTTATGTTGACTTGTTAACAAGTTTGATGAGAGAAGGTAAGGAACAACATGAAGATATATTTCTAAGAGATGCTGTGTTCAATCTGTTTGTGGCTGGGAGAGATACCTTAACTTCAGCTCTCACCTGGTTCTTCTGGCTTGTTGCTACAAACCCTTTGGTGGAAGAGAAGATTCTTGAAGAGATTAATCAAAACTTTGGAAGTAATGAAGAAAATGCAGTTTTGAGTGCAGAGGAGGTGAAGAAACTGGTTTATCTGCATGGTGCTATATGTGAAACATTGAGGCTGTTTCCACCTATACCCTTCGAACGCAAACAAGCACTAAAATCTGATGTACTTCCAAGTGGTCATTGTGTGAATCCCAGAACAAAGATATTACTATTTCTGTATGCAATGGGAAGAGTAGAAGAAATATGGGGAAAAGATTGCATGGAGTTGAAGCCAGAGAGATGGATCTCAGAGAAAGGAGGTAATGTTTATGTACCATCTTACAAATTCATTGCTTTCAATGCAGGACCAAGGTCTTGCTTGGGGAAAGACTTGTCCTTTATCCAGTTGAAGATGGTGGCAGCAGCTATTTTGCGGCGTTACCATGTTGAAGTGGTGGAGGGTTATGTTGCAACTCCTAGCCTCTCGATTGTTCTTCTCATGAAGGATGGTTTGAAGGTAAATATAAGGAAAAGAAAGTTTTAG 1503 0.4192 MAFLLVGYAAATIAALFCIYLRRCCTHPIFTEYPFVGMLPQVLCNLWRAHDYSTQVLKQHGGTGEFTGPWFTSMNYMLTCDPFNVHHMLSRNFHNYVKGPEFREIFQAFGDGIFTADAEAWKYDRDLFHSLFKHKSFEVFLEKTIQKKVKNSLLPLLNHHAQGRVVVDLQDVFNRFTFDNICSTVLGRDPECLSIDFPEVAIEKAFNQAEECIFYRHIVPKFVWKMQQWLQIGQEKKMTEACKTLDEFIYSCIASKREDLRRYEENENEETYVDLLTSLMREGKEQHEDIFLRDAVFNLFVAGRDTLTSALTWFFWLVATNPLVEEKILEEINQNFGSNEENAVLSAEEVKKLVYLHGAICETLRLFPPIPFERKQALKSDVLPSGHCVNPRTKILLFLYAMGRVEEIWGKDCMELKPERWISEKGGNVYVPSYKFIAFNAGPRSCLGKDLSFIQLKMVAAAILRRYHVEVVEGYVATPSLSIVLLMKDGLKVNIRKRKF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02808 500 PANTHER CYTOCHROME P450 24 492 - -
Viun4g02808 500 Pfam Cytochrome P450 32 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 CDD CYP86A 65 491 - -
Viun4g02808 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Viun4g02808 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 SUPERFAMILY Cytochrome P450 19 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02808 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02808 Viun-Chr4 42289583 42291261 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02808 33 498 Cytochrome P450 AT1G47620 47.479 3.87e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02808 - - gmx:100792360 770.385