Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02806 ATGTCCATGTTTTTCTACGCAGCAGCACTATTCTGCATCATATATTTCTTCCATCGGAGACTATGTTGCAGATACCCTCTTTTCACCGACTACCCCATCATCGGAATGCTACCGGATTTACTCTGCAATTTGTGGCGCATCCATGATTTTTCAGTCGAGGTGCTGAAATCACACGGCGGCACCGGCGAGTTCACCGGACCATGGTTTACCAACATGAACTATTTGATCACCAGCGACCCCATCAACGTGCACCATATCTTGAGCAAGAACTTCAAAAACTACGTCAAGGGACCCGAGTTTCGTGAGATTTTTCAGGCTTTTGGAGATGGAATTTTCACTGCTGATGGAGAAGCATGGAAATACAACAGGGATCTCTTCCAATCCTTGTTCAAACACAAAAGCTTCGAGCTTTTTCTGGAGAAAACCATTCGGAAGAAGGTGCAGAATAGTCTCCTTGTCGTGTTGGAACATGTGCAACAACATGGGAGTGTGGTGGATCTTCAAGATGTCTTCAACCGCTTCACCTTCGACAATATATGTTCCACGGTTCTCGGATACGACCCTTGTTGTCTTTCCCTTGATTTTCCAGAAGTTGCGATTGAGAAGGCTTTTAACGAAGTGGAAGAGTCCATTTTCTACAGACATGTGATGCCGAAGCGTGTTTGGAAGGTGCAGAAATGGCTTCAAATGGGTCGAGAGAAGACGATGACAGAAGCATGCAAGTCGTTTGATGAGTTCATACATGCACTCATAGCATCTAAGTTTGAGGCACTAAGCAGGTGCAATGAAAATGAAGAAACAGGAGAAGATTGTGCTGATTTGCTCACGACTTTGATGAGAGAAGGTAATAAGGAACAACATGATGATATATTTCTAAGAGATGCTGTGTTCAATCTGTTTGTGGCTGGGAGAGATACCTTAACTTCAGCTCTCACCTGGTTCTTCTGGCTTGTTGCTACAAACCCTTTGGTGGAAGAGAAGATTCTTGAAGAGATTAATCAAAACTTTGGAAGTAATGAAGAAAATGCAGTTTTGAGTGCAGAGGAGGTGAAAAAGCTGGTTTATCTGCATGGTGCTATATGTGAAACGTTGAGGCTCTTTCCTCCTATACCTTTCGAGCGGAAGCAAGCTCTTGAAGGTGATGTACTTCCAAGTGGTCATTGTGTGAATCCCAGAACAATGATATTGTTTTCACTGTATGCAATGGGAAGATTTGAGGAAATATGGGGGAAAGATTGCATGGAGTTGAAGCCAGAGAGATGGATTTCACAGAAAGGAGGTATTGTTTATGTGCCATCTTACAAATTCGTGGCTTTTAATGCAGGACCAAGAACTTGCTTAGGTAAAGACTTGTCCTTTCTTCAAATGAAGATTGTTGCAGCTGCAATTTTGCGGAATTATCATGTGCAAGTCGTGGAAGGTTCTGTTCCTACGCCAAGTCTTTCCGTTGTTCTTCTCATGAAGGATGGTTTTAAGGTTAAGATAACAAAAAGAGAAACTTAA 1503 0.4265 MSMFFYAAALFCIIYFFHRRLCCRYPLFTDYPIIGMLPDLLCNLWRIHDFSVEVLKSHGGTGEFTGPWFTNMNYLITSDPINVHHILSKNFKNYVKGPEFREIFQAFGDGIFTADGEAWKYNRDLFQSLFKHKSFELFLEKTIRKKVQNSLLVVLEHVQQHGSVVDLQDVFNRFTFDNICSTVLGYDPCCLSLDFPEVAIEKAFNEVEESIFYRHVMPKRVWKVQKWLQMGREKTMTEACKSFDEFIHALIASKFEALSRCNENEETGEDCADLLTTLMREGNKEQHDDIFLRDAVFNLFVAGRDTLTSALTWFFWLVATNPLVEEKILEEINQNFGSNEENAVLSAEEVKKLVYLHGAICETLRLFPPIPFERKQALEGDVLPSGHCVNPRTMILFSLYAMGRFEEIWGKDCMELKPERWISQKGGIVYVPSYKFVAFNAGPRTCLGKDLSFLQMKIVAAAILRNYHVQVVEGSVPTPSLSVVLLMKDGFKVKITKRET 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02806 500 CDD CYP86A 63 491 - -
Viun4g02806 500 Pfam Cytochrome P450 47 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 SUPERFAMILY Cytochrome P450 15 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Viun4g02806 500 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02806 500 PANTHER CYTOCHROME P450 20 492 - -
Viun4g02806 500 Gene3D Cytochrome P450 19 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02806 Viun-Chr4 42276315 42278030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02806 1 498 Cytochrome P450 AT4G39490 45.385 1.16e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02806 - - gmx:100792360 787.719