Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02803 ATGGCCATGTTTCTTCTCTACGCACCCATATTAGCATCATTCCTCTGCTCCCTATACCTGTTCCATCGCAGAAAACATTGCACACACCCCCTTTTGAAAGATTACTTCATCCTCGGCATGCTTCCACCGGTGATCTTCAACCTGTGGAGGATCCATGATTTCATCACCGAGGTTCTGAAGCTTCGTGGCGGCACTGGGGAGTTCAAAGGGCCATGGTTCACCAAAATGAACTATTTGATCACTTGCGACTCGCTCAACGTGCAGCACATGCTGTGCAAGCGATTCGACAACTACATCAAGGGACCCGAGTTTCGTGAGATTTTCGAACCCTTCGGAGATGGCGTTGTCACTGCGGATTCAGATACATGGAAGTACTTCAGAACCGTTCTCCATTCCTTGATCAAACAGAGAAGGTTCGAGGTGTTTGTTGATCAAACCGTTCAGAAGAAGGTGTACACAACCCTGATCCCGATACTGGATCATGCACAACAAGAAAAAAGAGTGGTGGATCTTCAAGACATCTTCAACCGGTTCACATTCGACAACATATGCTCCACAATCGTAGGACACGATCCTAAGTGTCTTTCGTTCGACTTTCCCGAGGTTGCAATCGAAAAGGCTTTCAACGAGTCTGAAGAATCGATATTCTACAGACACGTGGTGCCGGGGAGTGTTTGGAAGTTCCAAAAATGGCTCCAGATTGGTCAGGAGAAGAAGATGACAGAAGCATGCAGAACGTTTGATGAGTTCATATATTCATGCATAGCGTCCAAGCGAGAAGAGTTAAGCAAGTGCACAGAAGAAGAAACGAATGAAGCTCCATTTGATCTTCTAACAGCTTTGATCACAGAAGAGAGAGGACGTGTTCATGATGACAAGTTTCTGAGAGATGCTGCGTTTAACTTCTTTGTGGCGGGGAGAGAAACCATGACTTCAGCTCTTACATGGTTCTTTTGGCTTGTTTCCAAACACCCTTTGGTGGAAGCCAAGATTCTTGAAGAGATCAGAGATCATTTTAAGAGAAATGAAAAGAAAAACTATGACACGGTCCATTATGTTGTTCGTCAAAACCATGACCAAGAAAATTATCTGAAGCAATATCTATCGGGGGAAGTTTTAGGCATGGAGGAAGTGAAAAAGCTGGTTTATCTGCATGGTGCGTTGTGTGAAGCTCTGAGACTTTTCCCTCCGGTTCCTATTGAACGGAAGCAAGCAGTGAAAGCTGATGTTCTTCCAAGTGGGCATGGAGTGAATGCGGATACAATGATAATGTTTTCTCTGTATGCAATGGGAAGGAGTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAACCTGAGAGGTGGATATCTGAGAGAGGAGAAATTGCTTATGCACCAGCTTACAAATTCATTGCTTTCAATGCAGGACCAAGAATCTGTTTGGGAAAAGACCTGGCCTTTGTTCAGATGAAAATGGTAGCTGCTGCTATTTTGAACAAGTACTGTTTCAAAGTGGTGGAGGGTCATGTTGCAACTCCAACACATTCGATTGTTCTTCTCATGAAGAACGGTTTGGAGGCTAGGATAACGAAAAGAGAATAG 1584 0.4426 MAMFLLYAPILASFLCSLYLFHRRKHCTHPLLKDYFILGMLPPVIFNLWRIHDFITEVLKLRGGTGEFKGPWFTKMNYLITCDSLNVQHMLCKRFDNYIKGPEFREIFEPFGDGVVTADSDTWKYFRTVLHSLIKQRRFEVFVDQTVQKKVYTTLIPILDHAQQEKRVVDLQDIFNRFTFDNICSTIVGHDPKCLSFDFPEVAIEKAFNESEESIFYRHVVPGSVWKFQKWLQIGQEKKMTEACRTFDEFIYSCIASKREELSKCTEEETNEAPFDLLTALITEERGRVHDDKFLRDAAFNFFVAGRETMTSALTWFFWLVSKHPLVEAKILEEIRDHFKRNEKKNYDTVHYVVRQNHDQENYLKQYLSGEVLGMEEVKKLVYLHGALCEALRLFPPVPIERKQAVKADVLPSGHGVNADTMIMFSLYAMGRSEEIWGKDCLEFKPERWISERGEIAYAPAYKFIAFNAGPRICLGKDLAFVQMKMVAAAILNKYCFKVVEGHVATPTHSIVLLMKNGLEARITKRE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02803 527 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 Gene3D Cytochrome P450 17 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 SUPERFAMILY Cytochrome P450 19 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 PANTHER CYTOCHROME P450 22 519 - -
Viun4g02803 527 Pfam Cytochrome P450 45 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02803 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Viun4g02803 527 CDD CYP86A 67 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02803 Viun-Chr4 42254629 42256212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02803 3 526 Cytochrome P450 AT4G39490 42.964 4.82e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02803 - - var:108344605 899.427