Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02802 ATGGTTCTATATGCAGCCATAATAGTACCAGTGTTGTGCTCCCTATACATGTTCCACCGCAGAAGATGTTGCAAACACCCCCTCTTGAGGGATTACCCCATTCTTGGCATGTTACCAACCGTGCTCTTCAACTTGTGGCGCCTTCATGATTTTTTCACTGAAGGGCTCATAAAACATGGAGGCTCTGGTGACTTGAAAGGACCATGGTTCACCAACATGAACTATTTTGTCACTTGTGACTCCCGCAACGTGCAACACATGTTGTGCAAGAACTTCGACAACTATGTCAAGGGACATGACTTTCGTGAGATTTTCGAACCATTCGGAGATGGGTTTATCGCTGCCGATTATGAGACATGGAAGTACATCAGAACCCTTCTCCATTCTCTGATGAATCAACCAAGATTCAAAGCATTTATTGATCAAACCGTTCAGAAGAAGATACTCACAAGCCTGCTTCCAATGTTTGATCATGCACAACAACTAGGGAGGATGGTGAATCTTCAAGATGTTTTCTTGCGATTCACCTTCGATAACATATGCTTAACAACTGTAGGACACGATCCTAAGTGTCTTTCTATTGACTTCCCCGTAGTTGCAGTTGAGAAGGCTTTTAGAATGTCTGACAAGTCGATATTCTATAGACACACGGTGCCAAACTCTGTATGGAAGCTCCAAAAGTGGCTCCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATCCAAAACAATTGATGAGTTCATATATTCATTCATAACGTCCAAGCGAAAAGAGTTAAGGAAGTGCACAAAGGAAGAAATGAAGGAAGTTCCATTGGACTTGCTAAGTCTTTGGATGACAGAAGAGGGAGGATGTGAGCATAATGATAAGTTCATAAGGGATTTTGCATTTAACTTTATTGTAGCGGGGAGGGGATCCATGGCTTCGACTCTTACCTGGTTCTTTTGGCTTGTTATCAAACACCCTTTAGTGGAAGCTAAGATTCTTGAAGAGATCAAAGATCATTTTAAGACTAATGAAAAGAAAAATGATGAATATGGTCATGGTTTTGATGATCTGAAGCAATCTGTATCTGGGGAAGTTTTAGGTATGGAGGAGGTGAAGAAGCTGGTTTATCTGCATGGTGCTCTGTGTGAAGCTCTGAGACTTTTCCCTCCGATTCCTATTGAACGGAAGCAAGCAGTTAAAGTTGATATTCTTCCAAGTGGGCATAGAGTAAATGGCAATACAATGATAATGTTTTCTTTGTATGCAATGGGGAGGTGTGAAGAGACATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGGTGGATATCTGAGAAAGGAGAGATTGTTAAAGTAGCATCATACAAATTCATTGCTTTTAATGCAGGACCAAGAAGTTGCTTGGGAAAGGACTTGGCTTTGCTTCAAATGAAGATGGTGGCAGCTTCTATGTTGTGGAGTTATCGTTTCCAAATGGCTGAAGGTCATGTTGCAAGTCCAAGCCATTCATTTGGGCTTTCCATGAAGAATGGGTTGAAGGTTAGGATAATGAAAAGAGACCTTTGA 1554 0.4144 MVLYAAIIVPVLCSLYMFHRRRCCKHPLLRDYPILGMLPTVLFNLWRLHDFFTEGLIKHGGSGDLKGPWFTNMNYFVTCDSRNVQHMLCKNFDNYVKGHDFREIFEPFGDGFIAADYETWKYIRTLLHSLMNQPRFKAFIDQTVQKKILTSLLPMFDHAQQLGRMVNLQDVFLRFTFDNICLTTVGHDPKCLSIDFPVVAVEKAFRMSDKSIFYRHTVPNSVWKLQKWLQIGQEKKMTEASKTIDEFIYSFITSKRKELRKCTKEEMKEVPLDLLSLWMTEEGGCEHNDKFIRDFAFNFIVAGRGSMASTLTWFFWLVIKHPLVEAKILEEIKDHFKTNEKKNDEYGHGFDDLKQSVSGEVLGMEEVKKLVYLHGALCEALRLFPPIPIERKQAVKVDILPSGHRVNGNTMIMFSLYAMGRCEETWGKDCLEFKPERWISEKGEIVKVASYKFIAFNAGPRSCLGKDLALLQMKMVAASMLWSYRFQMAEGHVASPSHSFGLSMKNGLKVRIMKRDL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02802 517 Gene3D Cytochrome P450 15 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 SUPERFAMILY Cytochrome P450 16 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Viun4g02802 517 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 Pfam Cytochrome P450 67 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 CDD CYP86A 65 508 - -
Viun4g02802 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02802 517 PANTHER CYTOCHROME P450 21 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02802 Viun-Chr4 42241103 42242656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02802 31 517 Cytochrome P450 AT4G39490 42.073 3.08e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02802 - - var:108344605 799.66