Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02766 ATGCAAACCCTTGTGTCTTTATCACACTCTCCTTCAACTCCACACCTTCCAAACTTCACACCAAGGCCAAAGTTCCTTCCTCAACTTCACCACTCCTTCAATGCCTTCTCCTTGCCCCCATCTTCTCCTCTGCACCTCACTGCCACAAAGTCTCCACCTTTCTTCATTTCCTCTCCCAAACTTTCCTCTTTCAGGCTCCTTGCTGCTTCCATCTCCGATGCCAGAAGTGATGAACCAGCCAAAACCAGTGGCTTGGTTAAGACCCTTCAGCTTGGGGCCATGCTTGCCCTTTGGTACCTCTTGAACATCTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGTGTCACTGGTGATTAATTTAGTCTGGACTTTCAATCTCCACCCCAGACCCAGCCTCAGAGGTTCACAGCTAGCAACACTCCTTCCACTGGCTCTGGCTCACACATTAGGGAATGTCTTGACCAACATTAGTCTTTGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCTATGGAGCCTTTCTTTACCGTTCTTCTTTCTGCCCTTTTCTTGGGTCAGATGCCTACTCTATGGGTGTTTTCTTCCCTTATACCAATAGTTGGAGGAGTGGCATTGGCATCAATGACCGAAGTCTCTTTCAATTGGATTGGCTTCATCACTGCTATGGCAGCTAACATTACAAATCAATCAAGGAACGTTTTGAGCAAAAAAATGATGACTAGTGAAGAGGAAAGTTTGGACATTATCAATCTCTATGGAGTTTTAACAATGATTTCCTTCATCTTGTTGGTTCCATATGCCTTACTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACCTGCAATATGCAGCAAGCCAAGGGCTGAATGTTAGAGAGTTATGTATGAGATCAATTTTTTCTGCATTCTGCTTCCATGCATACCAACAGGTTTCATATATGATATTGGAGATGGTGTCACCTGTGACACACTCAGTTGCAAACAGTGTGAAGCGTGTGGTTATCATTGTTTCTTCCGTCATCTTCTTCCAAACTCCTGTCTCTCCTGTTAATGCACTTGGAACTGCCATAGCTCTATTGGGAGTTTTCTTGTACTCGAGGGCAAAGAGGATGAAGCCGGTGCAAAAGACAAACTGA 1185 0.4397 MQTLVSLSHSPSTPHLPNFTPRPKFLPQLHHSFNAFSLPPSSPLHLTATKSPPFFISSPKLSSFRLLAASISDARSDEPAKTSGLVKTLQLGAMLALWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFVSLVINLVWTFNLHPRPSLRGSQLATLLPLALAHTLGNVLTNISLCKVAVSFTHTIKAMEPFFTVLLSALFLGQMPTLWVFSSLIPIVGGVALASMTEVSFNWIGFITAMAANITNQSRNVLSKKMMTSEEESLDIINLYGVLTMISFILLVPYALLVEGVKFSPSYLQYAASQGLNVRELCMRSIFSAFCFHAYQQVSYMILEMVSPVTHSVANSVKRVVIIVSSVIFFQTPVSPVNALGTAIALLGVFLYSRAKRMKPVQKTN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02766 394 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 89 391 IPR004696 GO:0016020|GO:0022857|GO:0055085
Viun4g02766 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 308 386 - -
Viun4g02766 394 Pfam Triose-phosphate Transporter family 89 382 IPR004853 -
Viun4g02766 394 PANTHER SOLUTE CARRIER FAMILY 35 91 386 - -
Viun4g02766 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 130 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02766 Viun-Chr4 41984725 41989594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02766 1 393 Antiporters AT5G33320 54.458 7.54e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02766 K15283 - gmx:100819280 577.785