Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02751 ATGATTTCCACGTCTTCTCTTCTTCTTCTTATTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTTATGTTGTGCATATGTACAAAATAATGGACAAAAAACCATGCAACCCATCATCTCATGATCCTGAAGTGAGAAAGGGACCATGGACCATGGAAGAAGACTTGATCTTGATCAACTATATTGCAAATCATGGTGAAGGTGTTTGGAACTCTCTAGCCAAAGCTTCTGGTCTTAAAAGAACTGGAAAAAGTTGTCGACTTCGTTGGCTAAACTACCTTCGTCCTGATGTTAGAAGAGGGAACATTACAACAGAAGAACAGCTTTTGATCTTTGAGCTTCATGCAAAGTGGGGTAATAGGTGGTCCAAAATTGCAAAGCATCTTCCAGGAAGAACTGACAATGAGATTAAGAACTTTTGGAGAACCAGAATCCAGAAGCACATGAAGCAAACTGAGAATTCACAGCAACAGGGTAATAACAGTAATATTTCAGAGACAAATGATCATCATCATCATCAACATCATCATCAACATCAACAACATCATCAACATCATCAACATCATCATCATCAACCAAGCTCTAGCACAAGCCTTGCATCAAACATGGCACTGCAAATTGAGTCTTACTCCACACCCTCATATCAAGAAACTTTGGAGCCATTTCCATCACAGTTCCCTCCAATCACTGATCAATCAAGTTCCTGCACCAATCACAACATCAACACCCACACCAACTATTGGAACATAGAGGATTTGTGGTCTATGCAATTGCTCAATGGAGATTGA 786 0.3995 MISTSSLLLLILSLSFSLSLSYVVHMYKIMDKKPCNPSSHDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLKRTGKSCRLRWLNYLRPDVRRGNITTEEQLLIFELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKHMKQTENSQQQGNNSNISETNDHHHHQHHHQHQQHHQHHQHHHHQPSSSTSLASNMALQIESYSTPSYQETLEPFPSQFPPITDQSSSCTNHNINTHTNYWNIEDLWSMQLLNGD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02751 261 CDD SANT 103 142 IPR001005 -
Viun4g02751 261 ProSiteProfiles Myb-like domain profile. 94 144 IPR001005 -
Viun4g02751 261 ProSiteProfiles Myb-like domain profile. 41 93 IPR001005 -
Viun4g02751 261 Gene3D - 103 145 - -
Viun4g02751 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 148 IPR017930 -
Viun4g02751 261 CDD SANT 48 93 IPR001005 -
Viun4g02751 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 93 IPR017930 -
Viun4g02751 261 MobiDBLite consensus disorder prediction 171 191 - -
Viun4g02751 261 MobiDBLite consensus disorder prediction 148 198 - -
Viun4g02751 261 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 41 213 IPR044676 GO:0003700|GO:0006355|GO:0043565
Viun4g02751 261 FunFam Myb-related protein 305 103 176 - -
Viun4g02751 261 Pfam Myb-like DNA-binding domain 99 142 IPR001005 -
Viun4g02751 261 Pfam Myb-like DNA-binding domain 46 93 IPR001005 -
Viun4g02751 261 SMART sant 98 146 IPR001005 -
Viun4g02751 261 SMART sant 45 95 IPR001005 -
Viun4g02751 261 Gene3D - 46 98 - -
Viun4g02751 261 MobiDBLite consensus disorder prediction 149 164 - -
Viun4g02751 261 FunFam Myb transcription factor 46 98 - -
Viun4g02751 261 SUPERFAMILY Homeodomain-like 43 140 IPR009057 -
Viun4g02751 261 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02751 Viun-Chr4 41868908 41872575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02751 44 261 MYB Transcription Factor Family AT3G01530 55.505 3.09e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun4g02751 Myb_DNA-binding 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02751 K09422 - gmx:100305972 334.724