Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02736 ATGGCAGCAGAAGTTGTTGGTGGTGCTCTTCTTTCTGCATTTCTTCAGGTTGCATTCGACAGGCTGGCTTCTCCTCAATTTGTAGATTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATGCTCTTGCTGATGATGCAGAACAGAAACAGTTCACAGATCGACACGTCAAAGAATGGCTTCTTTCTGTCAAGGAGGCTGTCTTTGATGCAGAGGATCTCTTGGGTGAAATAGATTATGAACTCACCAGATGCCAAGTGGAAGCTGGATCTGAACATCAAACCTTTACTGACAAGGTATCTACCTTCTTCAACTCTACTTTCAGTTCATTTAACAAGAAAATTGAATCAGAGATGAAAGAAGTCCTAGAAAAACTAAAATATCTTGAACAGCAAAAGGATGCTCTTGGTTTGAAAAACGGTACTTCTTATTCTGATAGTAAGGTGTCACAGAAATTGCCATCTTCTTCTTTGGTGGTTGAAAGTATTATCTATGGCAGAGATGCAGACAAAGAAATTATCTTTAATTGGCTCAGATCTGAAACCGACAATGATAACCATCCATCTATATTTTCCATTGTGGGCATGGGTGGATTGGGTAAGACCACACTCGCCCATCATGTGTACCGTGACCCAAAGATGGAGGAGGCTAAATTTGATATCAAAGCTTGGGTTTGTGTTTCCGATCATTTTGATGTTTTGACAGTGACAAAAACAATTCTTGAGGCAATCACTAACTCTAAAGATGATAGCGGGAACCTAGAAATGGTTCATGGAAGATTGAAAGACGAAATATCAGGAAGGAAATTTCTTCTTGTTTTAGATGATGTTTGGAACGAAGGAGGAGAAGAATGGGAAGCTGTTCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAAAATTCTTGTCACAGCACGTGCTGAGAAAGTTGCTTCTAACATGAGGTCAAAAGTGCATCTCCTGAGGGAATTACGAGGGGATGAATGCTGGAATGTTTTTAAAAAACATGCATTAAGAGATGATGATCTTGAATTGAATGATGAGAAAGAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGATTACCTCTTGCTTTGAAAACAATTGGAAGTCTTCTCTGCAAAGAGTCATCCATTTCATATTGGAAGAGGGTATTGGAAAACGACATATGGGACTTGCCGAAAGAAGTTAAAATTATCCCTGCTCTATTACTGAGTTATCAACACCTTCCTTCTCATCTCAAGCGATGCTTTGCTTATTGTGCATTGTTTCCGAAAGATCATGAATTTGACAAGAAGGAATTAATTTTGTTGTGGATGGCTGAAGGTTTTCTCCATCACTCTCAACAAATCAATAATGTAGAAGAAATTGGTGAACAGTATTTCAATGATTTACTAACGAGGTCTTTCTTTCTTCAATCAGATTTCAAAACCTATTTCTCCATGCATGACCTTCTGAATGATTTGGCAAAATATGTTTGTGCAGATTTTTGTTTCAGGTTGAAATTTGATAAAGGAAACTGCATCCCCAAAAAAACTCGTCATTTTTCATTTGCATTCGATGACGTAGAATGTTTTGATGGTTTTGGGAGTTTCACTGATGCTAAAAGACTGCGTTCTTTTTTTCCATATGAAGAATTCGGGGGAAGAAATATTGATTATTATCCTTTGCAATTCAAGATTTTGGTACATGAATTGTTTTCCAACTTTAAATTTTTACGTGTCTTATCTTTGGATGGATATTCTGAGCTTAAAGAAGTCCCTGATTCTGTTGGTGATCTTAAACATCTCCATTCTTTAGACCTTTCGAGAACTGGGATACAAAAATTACCCGAATCAACATGTTTGCTCTATAACTTGCTAATCTTGAAGTTGAACTATTGTTCAAGTCTGGAGGAGTTGCCCTTAAATTTGCATAAACTCACCAAATTGCATTGTATTGAATTTGAAAATACAAAAGTAACAAAGATGCCAATGCATTTTGGAGAGTTGAAGAATCTTCAAGTACTCAGTCCGGTTTTTATCGATAAAAATAAGGAGTTTAGTACTAAGCATCTAGGATGCCTCAATCTTCATGGAAGACTATCAATTAATGAGGTGCAAAATATTGTAAATCCTCTAGATGCATTAGAAGCAAATCTGAAAAATAAAGATCTTGTGGAGTTACTGTTAAAATGGGAGTCAGACCATATCCCTGATGATCCAAGGAAAGAAAAGAAAGTATTGGAGAATCTACAACCTTCCAAAATCGTGGAATATTTGTCAATAGAGAACTATGGTGGTACAGAATTCCCAAGTTGGGTATTTGATAATTCATTATCAAATTTGGTGTCCTTAAGGCTGGAGGACTGTAAATATTGTTTGTGTTTGCCTCCCCTTGGACTATTGTCATCTCTGAAGACCCTTGAGATTATTGGATTTGATGGAATAGTGAGCATTGGTGATGAATTTTATGGGAATAGCTCTTCTTCGTTTACATCTTTGGAAAGTTTGAAATTTTCAAAGATGAAGGAATTGGAAGAATGTGAACGTAAGACTGCTGCTTTTCCACGTCTTGAAATTCTCTCGGTGTATCAATGTCCCAAGCTAAAAGGTCTGCCAGATCAACTTGTTAATGTAAAGAATCTTTATATAAGGAAAGCATCGTGCCTCGAAAGGATCACACTCATACTAGTCTCGAGATGTTGTCAATTCGCAGTTGCTCACGATTTGACTCATTTCCTAGTGAAGGTTTATCTGCTCCGCAGCTATTGTTAA 2793 0.3752 MAAEVVGGALLSAFLQVAFDRLASPQFVDFFRGRKLDEKLLGNLNIMLHSINALADDAEQKQFTDRHVKEWLLSVKEAVFDAEDLLGEIDYELTRCQVEAGSEHQTFTDKVSTFFNSTFSSFNKKIESEMKEVLEKLKYLEQQKDALGLKNGTSYSDSKVSQKLPSSSLVVESIIYGRDADKEIIFNWLRSETDNDNHPSIFSIVGMGGLGKTTLAHHVYRDPKMEEAKFDIKAWVCVSDHFDVLTVTKTILEAITNSKDDSGNLEMVHGRLKDEISGRKFLLVLDDVWNEGGEEWEAVRTPLSYGAPGSKILVTARAEKVASNMRSKVHLLRELRGDECWNVFKKHALRDDDLELNDEKEEIGRRIVEKCKGLPLALKTIGSLLCKESSISYWKRVLENDIWDLPKEVKIIPALLLSYQHLPSHLKRCFAYCALFPKDHEFDKKELILLWMAEGFLHHSQQINNVEEIGEQYFNDLLTRSFFLQSDFKTYFSMHDLLNDLAKYVCADFCFRLKFDKGNCIPKKTRHFSFAFDDVECFDGFGSFTDAKRLRSFFPYEEFGGRNIDYYPLQFKILVHELFSNFKFLRVLSLDGYSELKEVPDSVGDLKHLHSLDLSRTGIQKLPESTCLLYNLLILKLNYCSSLEELPLNLHKLTKLHCIEFENTKVTKMPMHFGELKNLQVLSPVFIDKNKEFSTKHLGCLNLHGRLSINEVQNIVNPLDALEANLKNKDLVELLLKWESDHIPDDPRKEKKVLENLQPSKIVEYLSIENYGGTEFPSWVFDNSLSNLVSLRLEDCKYCLCLPPLGLLSSLKTLEIIGFDGIVSIGDEFYGNSSSSFTSLESLKFSKMKELEECERKTAAFPRLEILSVYQCPKLKGLPDQLVNVKNLYIRKASCLERITLILVSRCCQFAVAHDLTHFLVKVYLLRSYC 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02736 930 Gene3D - 154 333 IPR027417 -
Viun4g02736 930 Gene3D - 334 417 IPR042197 -
Viun4g02736 930 Gene3D - 34 133 - -
Viun4g02736 930 Pfam Rx N-terminal domain 11 103 IPR041118 -
Viun4g02736 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 433 IPR027417 -
Viun4g02736 930 Coils Coil 123 150 - -
Viun4g02736 930 FunFam Probable disease resistance protein At1g63360 419 504 - -
Viun4g02736 930 PANTHER DISEASE RESISTANCE PROTEIN RP 69 864 IPR044974 GO:0006952
Viun4g02736 930 Gene3D - 418 504 IPR036388 -
Viun4g02736 930 SUPERFAMILY L domain-like 494 889 - -
Viun4g02736 930 PRINTS Disease resistance protein signature 275 289 - -
Viun4g02736 930 PRINTS Disease resistance protein signature 201 216 - -
Viun4g02736 930 PRINTS Disease resistance protein signature 604 620 - -
Viun4g02736 930 PRINTS Disease resistance protein signature 371 385 - -
Viun4g02736 930 FunFam Probable disease resistance protein At1g61300 158 330 - -
Viun4g02736 930 Gene3D Ribonuclease Inhibitor 562 910 IPR032675 -
Viun4g02736 930 Pfam NB-ARC domain 181 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02736 Viun-Chr4 41737808 41741317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02736 204 647 WRKY Transcription Factor Family AT5G45050 23.576 2.94e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02736 - - vun:114181814 1322.76