Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02728 ATGGCAGCAGAAGTTGTTGGTGGTGCTCTTCTTTCCGCTTTTCTTCAGGTTGCATTCGACAGGCTGGCTTCTCCTCAATTCGTAGATTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATGCTCTTGCTGATGATGCAGAACAGAAACAGTTCACAGATCCACACGTCAAAGCATGGCTTCTTTCTGTCAAGGAGGCTGTCTTTGATGCAGAGGATCTCTTGGGTGAAATAGATTATGAACTCACCAGATGCCAAGTGGAAGCTGGATCTGAACCTCAAACCTTTACTGACAAGGTATCAAATTTCTTCAACTCTACTTTCAGTTCATTTAACAAGAAAATTGAATCAGAGATGAAAGAAGTCCTAGAAAAACTAAAATATCTTGAACAGCAAAAGGATGCTCTTGGTTTGAAAAACGGTACTTCTTATTCTGATAATAAGGTGTCACAGAAATTGCCATCATCTTCTTTGGTGGTTGAAAGTATTATCTATGGCAGAGATGCAGACAAAGAAATTATCTTTAATTGGCTCACATCTGAAACCGACAATCATAACCATCCGTCTATACTTTCCATTGTGGGCATGGGTGGGTTGGGTAAGACCACACTCGCCCAACATGTATACCGTGACCCAAAGATGGAGGAGGCTAAGTTTGATATCAGAGCTTGGATTTGTGTTTCCGATCATTTTGATGTTTTGACAGTGACAAAAACAATTCTTGAGGCAATCACTAACTCTAAAGATGATAGCGGGAACCTAGAAATGGTTCATGGAAGATTGAAAGACCAAATATCAGGAAGGAAATTTCTTCTTGTTTTAGATGATGTTTGGAACGAAGGAGGAGAAGAATGGGAAGCTGTTCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAAAATTCTTGTCACAGCACGTGCCGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCGCCTAAAGCAATTAGAAGACGACGAATCCTGGAATGTTTTCAAAAAACAAGCACTAAAAGATGATGATCTTGAATGGAATGATGAGAAAGAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGATTACCTCTTGCTTTGAAAACAATTGGAAGTCTTCTCTGCAAAGAGTCATCCATTTCATATTGGAAGATGGTATTGGAAAACGACATATGGGAGTTGCCGAAAGAAGTGAAGATTATCCCTGCTCTATTACTGAGTTATCAACACCTTCCTTCTCATCTCAAGCGATGCTTTGCTTATTGTGCATTGTTTCCGAAAGATTATGGATTTGACAAGAAGGAATTAATTTTGTTGTGGATGGCCGAAGGTTTTCTCCATCACTCTCAACACATCAATAATGTAGAAGAAATTGGTGAACAATATTTCAATGATTTACTGACGAGGTCTTTCTTTCTTCAATCAGATTTCAAAACCCATTTCTCCATGCATGACCTTCTGAATGATTTGGCAAAATATGTTTGTGCAGAGTTTTGTTTCAGGTTGAAATTTGATAAAGGAAACTGCATCCCCAAAACAATCCGTCATTTTTCATTTGCATTCGATGACGTAGAATGTTTTGATGGTTTTGGGAGTTTAATTGATGCTAAAAGACTGCGTTCTTTTTTTCCATATAAAGAATTTGGGAGAAGATACATTGATCATTATCCTTTGCAATTCAAGATTTTGGTACATGAATTGTTTCCCAACTTTAAGTTTTTACGTGTCTTATCTTTGGATCAATATTCTGAGCTTAGAGAAGTCCCTGATTCTGTTGGTGATCTTAAACATCTCCATTCTTTAGATCTTTCGAGTACTGGGATACAAAAACTACCTGACTCAACATGTTTGCTCTATAACTTGCTAATCTTGAAGTTGAACTATTGTTCAAGTCTGGAGGAGTTGCCCTTAAATTTGCATAAACTCACCAAATTGCGTTGTCTTGAATTTATATCTACAAAAGTGACAAAGATGCCAATGCATTTTGGAGAGTTGAAGAATCTACAAGTACTTAGTGCGGTTTTTGTCGATAAAAATAACGAGTTCAGTACTAAGGATCTAGGAGTGCTCAATCTTCATGGAAGACTATCAATTAATGAAGTGCAAAATATTGTAAATCCTGTAGATGCATTAGAAGCAAATCTGAAAAATAAAGATCTTGTGAAGTTAGAGTTAAAATGGAAGTCAGACCATATCCCTGATGATCCAAGGAAAGAAAAGAAAGTATTGGAGAATCTACAACCTTCCAAAAATGTGGAACATTTGTCAATAGAGAACTATGGTGGTACACAATTCCCAAGTTGGGTATTTGATAATTCATTATCAAATTTGGTGTTCTTAATGCTGAAGGACTGTAAATATTGTTTGTGTATGCCTCCCCTTGGATTATTATCATCTCTGAAGACCCTTGAGATTATTGGATTTGATGGAATAGTGAGCATTGGTGCTGAATTTTATGGGAATAGCTCTTCTTCGTTTACATCTTTAGAAAGATTGACATTTTCAGACATGAAGGAATTGGAAGAATGTGAACACAAGACTGCTGCTTTTCCACGTCTTGAAACTCTCAAGGTGTATCAATGTCCCAAGCTAAAAGGTCTGCCAGATCAACTTGTTAATGTAAAGTATCTTAATATACGTGACAGCATGAAAGCATCGTGCCTTGAAAGGTGTGAGCATATTGTATCTCATAATTCACTTGAAGACTTGAACTTTTGTGCTTTTCCAATTATGAATATTCCAATGAGCCGTAGCTTTGATCTGCTTGAACAAATTGAGATCATTAGCGGTTGTGATTCTCTAACAACCTTTCCATTAGATTTCTTCCCAAACCTTAAGGCTCTTTCATTGTTTTTGTGTCATAACCTACAAATTATTTCACAGAAGCACACTCATAATCGTCTCAAGCATTTGTCAATTCTCAAATGCTCACGATTTGACTCATTTCCTAGTGAAGGCTTATCTGCTCCGCGGCTACAGAGAATGTATATTGATGGAGCGGAGAATTTGAAGTTGTTGCCAAAACGGATGCAAATCCTGCTTCCGTCTCTTAGTGAACTACAAATAATTAATTGTCCAAAAGTAGAGGATTTCCCAGACGGAGGTTTGCCACCAAATGTAAAAAAGGTGTCTCTTTCAAGTTTCAAACTTATGGCCTCCCTAAGAGAGACATTGGGTACCAACACATGTCTTCAAAGCTTGTCTATTGAAGAGATGGATGTGGAGTTTTTTCCCGATGAAGTTTTACTACCACAATCTATCACTTCTCTACGAATCTATGATTGCCCAAATCTTAAAAAGATGGAGTACAAGGGTCTCTGCCACCTCTCCTCTCTCACACTTTCTAACTGCCCCAACCTCCAATGCTTACCAGAGGATGGTCTCCCCAAATCCATCTCATGTCTTGAAATCTGGAACTGTCCATTGTTGGAACAACGTTGTCAGAATCCTGAAGGCCAAGACTGGAAAAAGATTGCTCACATTCAAAAACTAAGTGTTCGCTCATAA 3540 0.3816 MAAEVVGGALLSAFLQVAFDRLASPQFVDFFRGRKLDEKLLGNLNIMLHSINALADDAEQKQFTDPHVKAWLLSVKEAVFDAEDLLGEIDYELTRCQVEAGSEPQTFTDKVSNFFNSTFSSFNKKIESEMKEVLEKLKYLEQQKDALGLKNGTSYSDNKVSQKLPSSSLVVESIIYGRDADKEIIFNWLTSETDNHNHPSILSIVGMGGLGKTTLAQHVYRDPKMEEAKFDIRAWICVSDHFDVLTVTKTILEAITNSKDDSGNLEMVHGRLKDQISGRKFLLVLDDVWNEGGEEWEAVRTPLSYGAPGSKILVTARAEKVASNMRSKVHRLKQLEDDESWNVFKKQALKDDDLEWNDEKEEIGRRIVEKCKGLPLALKTIGSLLCKESSISYWKMVLENDIWELPKEVKIIPALLLSYQHLPSHLKRCFAYCALFPKDYGFDKKELILLWMAEGFLHHSQHINNVEEIGEQYFNDLLTRSFFLQSDFKTHFSMHDLLNDLAKYVCAEFCFRLKFDKGNCIPKTIRHFSFAFDDVECFDGFGSLIDAKRLRSFFPYKEFGRRYIDHYPLQFKILVHELFPNFKFLRVLSLDQYSELREVPDSVGDLKHLHSLDLSSTGIQKLPDSTCLLYNLLILKLNYCSSLEELPLNLHKLTKLRCLEFISTKVTKMPMHFGELKNLQVLSAVFVDKNNEFSTKDLGVLNLHGRLSINEVQNIVNPVDALEANLKNKDLVKLELKWKSDHIPDDPRKEKKVLENLQPSKNVEHLSIENYGGTQFPSWVFDNSLSNLVFLMLKDCKYCLCMPPLGLLSSLKTLEIIGFDGIVSIGAEFYGNSSSSFTSLERLTFSDMKELEECEHKTAAFPRLETLKVYQCPKLKGLPDQLVNVKYLNIRDSMKASCLERCEHIVSHNSLEDLNFCAFPIMNIPMSRSFDLLEQIEIISGCDSLTTFPLDFFPNLKALSLFLCHNLQIISQKHTHNRLKHLSILKCSRFDSFPSEGLSAPRLQRMYIDGAENLKLLPKRMQILLPSLSELQIINCPKVEDFPDGGLPPNVKKVSLSSFKLMASLRETLGTNTCLQSLSIEEMDVEFFPDEVLLPQSITSLRIYDCPNLKKMEYKGLCHLSSLTLSNCPNLQCLPEDGLPKSISCLEIWNCPLLEQRCQNPEGQDWKKIAHIQKLSVRS 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02728 1179 PRINTS Disease resistance protein signature 201 216 - -
Viun4g02728 1179 PRINTS Disease resistance protein signature 371 385 - -
Viun4g02728 1179 PRINTS Disease resistance protein signature 275 289 - -
Viun4g02728 1179 PRINTS Disease resistance protein signature 604 620 - -
Viun4g02728 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 433 IPR027417 -
Viun4g02728 1179 FunFam Probable disease resistance protein At1g63360 419 504 - -
Viun4g02728 1179 Gene3D Ribonuclease Inhibitor 562 929 IPR032675 -
Viun4g02728 1179 FunFam Probable disease resistance protein At1g61300 158 330 - -
Viun4g02728 1179 Coils Coil 123 150 - -
Viun4g02728 1179 Pfam NB-ARC domain 181 399 IPR002182 GO:0043531
Viun4g02728 1179 Gene3D - 154 333 IPR027417 -
Viun4g02728 1179 ProSiteProfiles Leucine-rich repeat profile. 608 629 IPR001611 GO:0005515
Viun4g02728 1179 SUPERFAMILY L domain-like 494 889 - -
Viun4g02728 1179 Gene3D - 34 145 - -
Viun4g02728 1179 Gene3D Ribonuclease Inhibitor 972 1177 IPR032675 -
Viun4g02728 1179 PANTHER DISEASE RESISTANCE PROTEIN RP 69 872 IPR044974 GO:0006952
Viun4g02728 1179 Pfam Rx N-terminal domain 11 103 IPR041118 -
Viun4g02728 1179 Gene3D - 334 417 IPR042197 -
Viun4g02728 1179 Gene3D - 418 504 IPR036388 -
Viun4g02728 1179 SUPERFAMILY L domain-like 861 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02728 Viun-Chr4 41692483 41696920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02728 202 647 WRKY Transcription Factor Family AT5G45050 24.125 1.02e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02728 - - vra:106774688 1634