Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02715 ATGGCAGCAGAACTTGTTGGTGGTGCTCTTCTTTCTGCTTTTCTTCAGGTTGCATTCGAAAAGCTGGCTTCTACTCAGTTTGCTGATTTCTTTCGCGGCAGAAAACTTGATGAGAAGCTTCTCGGCAATTTGAACATCATGCTGCACTCCATCAATGCTCTCGCTCATGATGCAGAACAAAAACAGTTCACAGATCCACACATTAAAGCATGGCTTTTTTCTGTCAAAGAGGCTGTCTTTGATGCAGAGGATATCTTGGATGAAATAGACTATGAAATCACCAGATGCAAAGTGGAAGCTGAATCTGAACCTCAAACCTTTACTTACAAGGTATCAAATTTCTTCACCTCTACTTTCAGTTCATTTAACAAGAAAATTGATTCAGGACTGAAAGAAGTGCTAGAAAAACTAGAATATCTTGCCAAGCAAAAGGGTGCTCTTGGTTTGAAAGAGGGTACTTATTCTGATGATAGATCACGTAGTAAAGTGTCACAGAAGTTGCCATCATCTTCTTTGGTGGTTGAAAGTATTATCTATGGCAGAGATGCAGACAAAGAAATTATCTTTAATTGGCTCAGATCTGAAACCGACAATGATAACCATCCATCTATATTTTCCATTGTGGGCATGGGTGGATTGGGTAAGACCACACTCGCCCATCATGTGTACCGTGACCCAAAGATGGAGGAGGCTAAATTTGATATCAAAGCTTGGGTTTGTGTTTCCGATCATTTTGATGTTTTGACAGTGACAAAAACAATTCTTGAGGCAATCACTAACTCTAAAGATGATAGCGGGAACCTAGAAATGGTTCATGGAAGATTGAAAGACGAAATATCAGGAAGGAAATTTCTTCTTGTTTTAGATGATGTTTGGAACGAAGGAGGAGAAGAATGGGAAGCTGTTCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAAAATTCTTGTCACGGCACGTGCTGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCTCCTGAGGGAATTACGAGGGGATGAATGCTGGAATGTTTTTAAAAAACATGCATTAAAAGATGATGATCTTGAATTGAATGATGATCTAAAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGATTACCTCTTGCTTTGAAAACAATCGGATGTCTTCTCCGCACAAAGTCATCCATTTCATATTGGAAGAGTGTATTGGAAAACGACATATGGGAGTTGCCGAAAGAAGTGAAAATTATCCCTGCTCTATTACTGAGTTATCAACACCTTCCTTCTCATCTCAAGCGATGCTTTGCTTATTGTGCATTGTTTCCGAAAGATCATGAATTTGACAAGAAGGAATTAATTTTGTTGTGGATGGCTGAAGGTTTTCTCCATCACTCTCAACAAATCAATAATGTAGAAGAAATTGGTGAACAGTATTTCAATGATTTACTAACGAGGTCTTTCTTTCTTCAATCAGATTTCAAAACCTATTTCTCCATGCATGACCTTCTGAATGATTTGGCAAAATATGTTTGTGCAGATTTTTGTTTCAGGTTGAAATTTGATAAAGGAAACTGCATCCCCAAAAAAACTCGTCATTTTTCATTTGCATTCGATGACGTAGAATGTTTTGATGGTTTTGGGAGTTTCACTGATGCTAAAAGACTGCGTTCTTTTTTTCCATATGAAGAATTCGGGGGAAGAAATATTGATTATTATCCTTTGCAATTCAAGATTTTGGTACATGAATTGTTTTCCAACTTTAAATTTTTACGTGTCTTATCTTTGGATGGATATTCTGAGCTTAAAGAAGTCCCTGATTCTGTTGGTGATCTTAAACATCTCCATTCTTTAGACCTTTCGAGAACTGGGATACAAAAATTACCCGAATCAACATGTTTGCTCTATAACTTGCTAATCTTGAAGTTGAACTATTGTTTAAGTCTGGAGGAGTTGCCCTTAAATTTGCATAAACTCACCAAATTGCATTGTATTGAATTTGAAAATACAAAAGTAACAAAGATGCCAATGCATTTTGGAGAGTTGAAGAATCTTCAAGTACTCAGTCCGGTTTTTATCGATAAAAATAAGGAGTTTAGTACTAAGCATCTAGGATGCCTCAATCTTCATGGAAGACTATCAATTAATGAGGTGCAAAATATTGTAAATCCTGTAGATGCATTAGAAGCAAATCTGAAAAATAAAGATCTTGTGGAGTTAGAGTTAAAATGGGAGTCAGACCATATCCCTGATGATCCAAGGAAAGAAAAGAAAGTATTGGAGAATCTACAACCTTCCAAAATCGTGGAATATTTGTCAATAGAGAACTATGGTGGTACAGAATTCCCAAGTTGGGTATTTGATAATTCATTATCAAATTTGGTGTTCTTAAGGCTGGAGGACTGTAAATATTGTTTGTGTTTGCCTCCCCTTGGACTATTGTCATCTCTGAAGACCCTTGAGATTATTGGATTTGATGGAATAGTGAGCATTGGTGATGAATTTTATGGGAATAGCTCTTCTTCGTTTACATCTTTGGAAAGTTTGGCATTTTCAAAGATGAAGGAATTGGAAGAATGTGAACGTAAGACTGCTGCTTTTCCACGTCTTGAATATCTCGATGTGTATGAATGTCCCAAGCTAAAAGGTCTGCCAGATCAACTTGTTAATGTAAAGAATCTTTATATAAGGAAAGCATCGTGCCTCGAAAGGTGTGAGCATACTGTATCTCATAATTCACTTGAAGCCTTGACCTTTCTTGTTTTTCCAATTATGAATATTTCAATGAGTCGTAGCTTTGATCTGCTTGAAGAAATTCTCATCTTTGACAGTTGTGATTCTTTAACAACCTTTCCACTCGATTTCTTCCCAAACCTTAAGTATCTTTCATTGTGTTCCTGTCGTAACCTACAAATTATTTCACAGAAGCACACTCATAATCGTCTCAAGCATTTGACAATTCGCAGTTGCTCACGATTTGACTCATTTCCTAGTGAAGGTTTATCTGCTCCGCAGCTATTGTTTATTGATATTGATGGAGTGGAGAATTTGAAGTTGTTGCCAAAACGCATCAGAATCCTGCTTCCGTCTCTTTATATACTAAACATAATTAATTGTCCAAAAGTGGAGATGTTCCCAGACGGAGGTTTGCCACCATATGTAGGCCAAGTGTCTCTTTCAAGTTTGAAACTTATAGCCTCCCTAAAAGAGACCTTGGGTACCAACACATTTATGAAAAGATTGTGTATTGAAAATATAGATGTGGAGTTTTTTCCCGATGAAGTTTTGCTACCACACTCTATCACTTCTCTAGAAATCTGTCGCTGCCCAAATCTTAAAAAGATGGAGTACAAGGGTCTCTGCCACCTCTCCTATCTCAAACTTTATGACTGTCCCAACCTCCAATGCTTACCGGAGGATGGTCTCCCCAAATCCATCTCCTCTCTTCGGATCTGGAGCTGTCCATTGTTGGAACGACGTTGTCAGAATCCCGAAGGCCAAGACTGGAACAAGATTGCTCACATTGAGACCTAA 3525 0.3796 MAAELVGGALLSAFLQVAFEKLASTQFADFFRGRKLDEKLLGNLNIMLHSINALAHDAEQKQFTDPHIKAWLFSVKEAVFDAEDILDEIDYEITRCKVEAESEPQTFTYKVSNFFTSTFSSFNKKIDSGLKEVLEKLEYLAKQKGALGLKEGTYSDDRSRSKVSQKLPSSSLVVESIIYGRDADKEIIFNWLRSETDNDNHPSIFSIVGMGGLGKTTLAHHVYRDPKMEEAKFDIKAWVCVSDHFDVLTVTKTILEAITNSKDDSGNLEMVHGRLKDEISGRKFLLVLDDVWNEGGEEWEAVRTPLSYGAPGSKILVTARAEKVASNMRSKVHLLRELRGDECWNVFKKHALKDDDLELNDDLKEIGRRIVEKCKGLPLALKTIGCLLRTKSSISYWKSVLENDIWELPKEVKIIPALLLSYQHLPSHLKRCFAYCALFPKDHEFDKKELILLWMAEGFLHHSQQINNVEEIGEQYFNDLLTRSFFLQSDFKTYFSMHDLLNDLAKYVCADFCFRLKFDKGNCIPKKTRHFSFAFDDVECFDGFGSFTDAKRLRSFFPYEEFGGRNIDYYPLQFKILVHELFSNFKFLRVLSLDGYSELKEVPDSVGDLKHLHSLDLSRTGIQKLPESTCLLYNLLILKLNYCLSLEELPLNLHKLTKLHCIEFENTKVTKMPMHFGELKNLQVLSPVFIDKNKEFSTKHLGCLNLHGRLSINEVQNIVNPVDALEANLKNKDLVELELKWESDHIPDDPRKEKKVLENLQPSKIVEYLSIENYGGTEFPSWVFDNSLSNLVFLRLEDCKYCLCLPPLGLLSSLKTLEIIGFDGIVSIGDEFYGNSSSSFTSLESLAFSKMKELEECERKTAAFPRLEYLDVYECPKLKGLPDQLVNVKNLYIRKASCLERCEHTVSHNSLEALTFLVFPIMNISMSRSFDLLEEILIFDSCDSLTTFPLDFFPNLKYLSLCSCRNLQIISQKHTHNRLKHLTIRSCSRFDSFPSEGLSAPQLLFIDIDGVENLKLLPKRIRILLPSLYILNIINCPKVEMFPDGGLPPYVGQVSLSSLKLIASLKETLGTNTFMKRLCIENIDVEFFPDEVLLPHSITSLEICRCPNLKKMEYKGLCHLSYLKLYDCPNLQCLPEDGLPKSISSLRIWSCPLLERRCQNPEGQDWNKIAHIET 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02715 1174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 436 IPR027417 -
Viun4g02715 1174 Gene3D Ribonuclease Inhibitor 565 918 IPR032675 -
Viun4g02715 1174 Pfam NB-ARC domain 184 402 IPR002182 GO:0043531
Viun4g02715 1174 Gene3D - 421 507 IPR036388 -
Viun4g02715 1174 PRINTS Disease resistance protein signature 951 967 - -
Viun4g02715 1174 PRINTS Disease resistance protein signature 278 292 - -
Viun4g02715 1174 PRINTS Disease resistance protein signature 204 219 - -
Viun4g02715 1174 PRINTS Disease resistance protein signature 374 388 - -
Viun4g02715 1174 Gene3D - 16 128 - -
Viun4g02715 1174 Pfam Rx N-terminal domain 11 103 IPR041118 -
Viun4g02715 1174 SUPERFAMILY L domain-like 497 892 - -
Viun4g02715 1174 Gene3D - 337 420 IPR042197 -
Viun4g02715 1174 FunFam Probable disease resistance protein At1g61300 160 333 - -
Viun4g02715 1174 FunFam Probable disease resistance protein At1g63360 422 507 - -
Viun4g02715 1174 Gene3D - 158 336 IPR027417 -
Viun4g02715 1174 Gene3D Ribonuclease Inhibitor 922 1173 IPR032675 -
Viun4g02715 1174 SUPERFAMILY L domain-like 935 1170 - -
Viun4g02715 1174 PANTHER DISEASE RESISTANCE PROTEIN RP 55 860 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02715 Viun-Chr4 41656648 41662058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02715 206 650 WRKY Transcription Factor Family AT5G45050 23.922 7.51e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02715 - - vra:106774688 1605.5