Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02712 ATGGTAAAATACCTAACTATTAATTTCCGCATTGTGGTTCGTAAACTGCAATTCAAATTATACATTTCCATTCACCATTTCTCAACCCCTGCCATGGCAGCGGAACTTGTTGGTGGTGCTCTTCTTTCCGGTTTTCTTCAGGTTGCATTCGACAGGCTGGCTTCTCCTCAAGTTGTACAGTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTTAGCAAACTGAACATCGTGCTGCACTCAATCAATGATCTCGCTGATGATGCTGAACAAAAACAGTTCAGAAATCCACACATCAAAGCTTGGCTTTTTGCTGTCAAAGATGTTGTCTTCGATGCAGAGGATCTCTTGAAGGAAATAGAGTATGAACTCACAAGATGCCAAGTGGAAGCTGGATCAGACCCACAAACCCTTACTTCCAAGGTATCAAATTTCTTCAACTCTACTTTCACTTCATTTAACAAGAAAATTGAATCAGAGATGAGAGATGTCCTAGAAAAACTAGAATATCTGGCAAAGCAAAAGGGTGCTCTTGGTTTGAAAGAGGGTATTTACTCTGGTGATAGATCAGGTAGTAAGGTGTCACAGAAATTGCCATCATCTTCTTTGGTGGTTGAAAGTGTTATTTATGGAAGAGATGTGGACAAAGAAATTATCTTTAATTGGCTCACATCTGAAACTGACAATCATAACCATCCTTCAGTACTTTCCATTGTGGGAATGGGTGGGTTGGGTAAGACCACACTCGCCCAACATGTATACAATGACCCAAAGATAGAAGAGGCTAAATTTGATATCAGAGCTTGGGTTTGTGTTTCCGACCATTTTGATGTTTTGATAGTGACAAAAACAATTCTTGAGGCAATCACTAAATCTAAAGATGATAGCGGAGACCTGGAAATGGTTCATGGAAGATTGAAAGAAAGAATATCAGGAAGGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAGAGACGAGAAGAATGGGAAGTTGTGCGAACTCCTCTTAGTTATGGGGCACCAGGAAGTAGAATTCTTGTGACAACACGTGGTGAGAAAGTTGCTTCTAACATGATGTCTGAAGTGCATAGGCTAAAGCAATTAGAAGAAGAGGAATGTTGGAAACTTTTCAAAAAGCATGCACTAAAAGATGATGATCATGAATTGAATGATGAGAAAAAGGAGATTGGTAGAAGGATAGTTGATAAGTGCAAAGGATTACCCCTTGCTCTGAAAACAATTGGAAGTCTTCTCCGCACAAAGTCATCCATTTCAGATTGGCAAAGTGTATTGGAAAGCGACATATGGGACTTACCGAAAGAAGTTGAAATTATGCCTGCTCTACTATTGAGTTATCAACACCTTCCTTCGCATCTCAAGAGGTGCTTTGCTTATTGTGCATTATTTCCAAAAGATTATGAATTTGACAAGAAGGAATTAATTTTGTTGTGGATGGCTGAAGATTTTCTTCATCACTCTAAACAGATCAAGAATGTACAAGAAATTGGTGAACAATATTTCGACGATCTATTAACAAGGTCCTTCTTTCTTCAATTAAGCTCTGAAATGCGACAAATCAAGAATAGATAG 1593 0.3873 MVKYLTINFRIVVRKLQFKLYISIHHFSTPAMAAELVGGALLSGFLQVAFDRLASPQVVQFFRGRKLDEKLLSKLNIVLHSINDLADDAEQKQFRNPHIKAWLFAVKDVVFDAEDLLKEIEYELTRCQVEAGSDPQTLTSKVSNFFNSTFTSFNKKIESEMRDVLEKLEYLAKQKGALGLKEGIYSGDRSGSKVSQKLPSSSLVVESVIYGRDVDKEIIFNWLTSETDNHNHPSVLSIVGMGGLGKTTLAQHVYNDPKIEEAKFDIRAWVCVSDHFDVLIVTKTILEAITKSKDDSGDLEMVHGRLKERISGRKFLLVLDDVWNERREEWEVVRTPLSYGAPGSRILVTTRGEKVASNMMSEVHRLKQLEEEECWKLFKKHALKDDDHELNDEKKEIGRRIVDKCKGLPLALKTIGSLLRTKSSISDWQSVLESDIWDLPKEVEIMPALLLSYQHLPSHLKRCFAYCALFPKDYEFDKKELILLWMAEDFLHHSKQIKNVQEIGEQYFDDLLTRSFFLQLSSEMRQIKNR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02712 530 PANTHER DISEASE RESISTANCE PROTEIN RP 79 518 IPR044974 GO:0006952
Viun4g02712 530 Pfam Rx N-terminal domain 42 133 IPR041118 -
Viun4g02712 530 PRINTS Disease resistance protein signature 235 250 - -
Viun4g02712 530 PRINTS Disease resistance protein signature 309 323 - -
Viun4g02712 530 PRINTS Disease resistance protein signature 405 419 - -
Viun4g02712 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 467 IPR027417 -
Viun4g02712 530 Gene3D - 191 368 IPR027417 -
Viun4g02712 530 Gene3D - 57 162 - -
Viun4g02712 530 Coils Coil 154 174 - -
Viun4g02712 530 FunFam Probable disease resistance protein At5g66910 368 449 - -
Viun4g02712 530 Pfam NB-ARC domain 217 433 IPR002182 GO:0043531
Viun4g02712 530 FunFam Probable disease resistance protein At1g63360 453 529 - -
Viun4g02712 530 Gene3D - 369 457 IPR042197 -
Viun4g02712 530 FunFam Probable disease resistance protein At1g61300 192 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02712 Viun-Chr4 41591872 41594217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02712 235 422 WRKY Transcription Factor Family AT5G45050 26.733 1.12e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02712 - - vun:114181814 1023.46