Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02710 ATGTCTTCTTCACTTCAAGTGATCGCTCTAGGCATCTTAAGTGTAATGTTTGAAAGGCTCTCAAAAGATGGAAGACAGTTTGAGGTTGAAACCAGGGATCATATCAAAAGGTACGCCGAGGCTGGTTTAAGAACCCTTGTAGTCACATACCGTGAACTTGATGAAGAAGAGTATAAGTTATGGGATAAGGAGTTTTCAAAGGTCAAAACTTCTGTAACAGAAGACCGAGATGCACTTGTGGATGCAGCTTCTGACAAGATGGAAAGAGATTTGATACTTCTCGGTGCTACTGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAGTGTATTGAAAAGCTTGCACGGGCAAAAATCAAGTTATGGGTATTGACTGGAGACAAGATGGAAACTGCTGTCAACATAGGGTATGCTTGCAGTTTACTTAGAAAGGACATGAAAAAGATAGTGATCACTCTTGATTCCTCAGATATCCTATACTTGGAAAAACAAGGGGACAAACAGGCTCTAGCAAAGGCTTCTCTTGAAAGCATTAAGAAGCAAATTGGAGAAGGAATCTCACAAATCAACTCTGCAAAGGAGAGTTCTAATGCAAATAAAGGAAGTTCTTCTGGGTTTGGCTTGATAATCGATGGGAAGTCCTTGGATTATTCTCTTAGCAAGAATTTGGAAAGGTCCTTCTTTGAGCTTGCCATTAGTTGTGCTTCTGTCATATGTTGTCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGGTTGGTAAAATTGGGAACGGGGAAGACAACATTGTCCATTGGTGATAGGGCAAATGATGTTGGCATGCTTCAGGAGGCCGATATTGGAGTTGGTATTAGTGGTGCGGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCTATAGCTCAATTCCGGTTTCTGGAACGTCTTTTGTTGGTACATGGGCATTGGTGTTATCGCCGTATATCAATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTTTTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTAA 1074 0.4106 MSSSLQVIALGILSVMFERLSKDGRQFEVETRDHIKRYAEAGLRTLVVTYRELDEEEYKLWDKEFSKVKTSVTEDRDALVDAASDKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRKDMKKIVITLDSSDILYLEKQGDKQALAKASLESIKKQIGEGISQINSAKESSNANKGSSSGFGLIIDGKSLDYSLSKNLERSFFELAISCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDRANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDW 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02710 357 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 357 - -
Viun4g02710 357 FunFam Phospholipid-transporting ATPase 93 305 - -
Viun4g02710 357 NCBIfam phospholipid-translocating P-type ATPase 5 357 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun4g02710 357 SUPERFAMILY Calcium ATPase, transmembrane domain M 314 349 IPR023298 -
Viun4g02710 357 Pfam Phospholipid-translocating P-type ATPase C-terminal 293 357 IPR032630 -
Viun4g02710 357 NCBIfam HAD-IC family P-type ATPase 232 348 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun4g02710 357 Gene3D - 90 305 IPR023214 -
Viun4g02710 357 SUPERFAMILY HAD-like 87 313 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02710 Viun-Chr4 41585496 41590632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02710 5 357 Primary Pumps ATPases AT3G27870 74.788 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02710 K01530 - gmx:100817020 636.336