Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02708 ATGAACTCACAAGATGCCAAGTGGAAGCTGGATCAGACCCACAAACCCTTACTTCCAAGAGTATTACCGAGTCTGGCATGTGCTTACACAAGTTTCTTACAATGGCTTCCAATGTCTTCTTCACTTCAAGTGATCGCTCTAGGCATCTTAAGTGTAATGTTTGAAAGGCTCTCAAAAGATGGAAGACAGTTTGAGGTTGAAACCAGGGATCATATCAAAAGGTACGCCGAGGCTGGTTTAAGAACCCTTGTAGTCACATACCGTGAACTTGATGAAGAAGAGTATAAGTTATGGGATAAGGAGTTTTCAAAGGTCAAAACTTCTGTAACAGAAGACCGAGATGCACTTGTGGATGCAGCTTCTGACAAGATGGAAAGAGATTTGATACTTCTCGGTGCTACTGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAGTGTATTGAAAAGCTTGCACGGGCAAAAATCAAGTTATGGGTATTGACTGGAGACAAGATGGAAACTGCTGTCAACATAGGGTATGCTTGCAGTTTACTTAGAAAGGACATGAAAAAGATAGTGATCACTCTTGATTCCTCAGATATCCTATACTTGGAAAAACAAGGGGACAAACAGGCTCTAGCAAAGGCTTCTCTTGAAAGCATTAAGAAGCAAATTGGAGAAGGAATCTCACAAATCAACTCTGCAAAGGAGAGTTCTAATGCAAATAAAGGAAGTTCTTCTGGGTTTGGCTTGATAATCGATGGGAAGTCCTTGGATTATTCTCTTAGCAAGAATTTGGAAAGGTCCTTCTTTGAGCTTGCCATTAGTTGTGCTTCTGTCATATGTTGTCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGGTTGGTAAAATTGGGAACGGGGAAGACAACATTGTCCATTGGTGATAGGGCAAATGATGTTGGCATGCTTCAGGAGGCCGATATTGGAGTTGGTATTAGTGGTGCGGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTGCTATAGCTCAATTCCGGTTTCTGGAACGTCTTTTGTTGGTACATGGGCATTGGTGTTATCGCCGTATATCAATGATGTAA 1086 0.4217 MNSQDAKWKLDQTHKPLLPRVLPSLACAYTSFLQWLPMSSSLQVIALGILSVMFERLSKDGRQFEVETRDHIKRYAEAGLRTLVVTYRELDEEEYKLWDKEFSKVKTSVTEDRDALVDAASDKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRKDMKKIVITLDSSDILYLEKQGDKQALAKASLESIKKQIGEGISQINSAKESSNANKGSSSGFGLIIDGKSLDYSLSKNLERSFFELAISCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDRANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02708 361 FunFam Phospholipid-transporting ATPase 130 342 - -
Viun4g02708 361 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 47 361 - -
Viun4g02708 361 Gene3D - 127 342 IPR023214 -
Viun4g02708 361 SUPERFAMILY HAD-like 124 350 IPR036412 -
Viun4g02708 361 NCBIfam HAD-IC family P-type ATPase 269 360 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun4g02708 361 Pfam Phospholipid-translocating P-type ATPase C-terminal 330 361 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02708 Viun-Chr4 41585491 41593903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02708 42 361 Primary Pumps ATPases AT3G27870 73.438 1.12e-164 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02708 K01530 - gmx:100817020 562.762