Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02702 ATGGCAGCAGAACTCGTTGGTGGTGCTCTTCTCTCTGCTTTCCTTCAGGTTGCGTTTGACAGGCTGGCTTCTCCTCAAGTTTTAGACTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCAGCAAATTGCATATCACGCTGCACTCCATCAATTCTCTTGCTGATGATGCAGAACAAAAGCAGTTCAGAGATCCCTACGTCAAAGCATGGCTTCTTGCTGTCAACGACGCTGTCTTTGATTCAGAGGTTCTCTTGGATTCAATTGACTATGAACTCATCAAATGCAACGTGGAAGCTGAATCTGCGCCTCAAAGCTTGACTTCCAAGGTATCCAATTTCTTCGATTCTACTTTCCGTTCATTTAACAAGAAAATTAACTCGGGGATGAGAGAAGTCACAGAAAAACTAGAATATCTTGCAAAGCAAAAGGGTGCTCTTGGCCTGAAAAAGTATAGTTATTCTGGTGATGGACCAGATAGTAAAGTGCCACAAAAATTGCCATCATCTTCTTTGGTGGTTGAAAGTGTTATTTACGGCAGAGATGCGGACAAAGAAATTATCTTTAATTGGCTCACTTCCGAAACTGACAATCATAACCATCTATCTATACTTTCCATTGTGGACATGGGTGGATTAGGTAAGACCACACTCGCCCAACATGTGTATAATGACCCAAAGATCGATGATGCAAAATTTGATATCAAAGCCTGGGTCTGTGTTTCAGATCATTTTGATGTTTTGACAGTGACAAAAACAATTCTTGAGTCGATCACTGATAAAAAAGATGATAGTGGGAACTTAAACATGGTTCACAAAAATCTGAAAGAAAAATTGTCAGTGAAGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAAACGAGAAGAATGGGAGGTTGTGCAAACTCCTCTTAACTACGGGGCTCCAGGAAGTAGAATTCTTGTCACAACACGTGCTGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCACCTAAAGCAATTAGAAAAGGATGAATGCTGGAAAGTTTTTAAAAAGCATGCACTAAAAGATGATGATCTTGAATTGAATGATGAGAAAAAGAAGATTGGTAGAAGCATAGTTGAGAATGCAAAGGATTACCTCTCGCTTTGA 1143 0.3963 MAAELVGGALLSAFLQVAFDRLASPQVLDFFRGRKLDEKLLSKLHITLHSINSLADDAEQKQFRDPYVKAWLLAVNDAVFDSEVLLDSIDYELIKCNVEAESAPQSLTSKVSNFFDSTFRSFNKKINSGMREVTEKLEYLAKQKGALGLKKYSYSGDGPDSKVPQKLPSSSLVVESVIYGRDADKEIIFNWLTSETDNHNHLSILSIVDMGGLGKTTLAQHVYNDPKIDDAKFDIKAWVCVSDHFDVLTVTKTILESITDKKDDSGNLNMVHKNLKEKLSVKKFLLVLDDVWNEKREEWEVVQTPLNYGAPGSRILVTTRAEKVASNMRSKVHHLKQLEKDECWKVFKKHALKDDDLELNDEKKKIGRSIVENAKDYLSL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02702 380 Pfam NB-ARC domain 183 374 IPR002182 GO:0043531
Viun4g02702 380 PRINTS Disease resistance protein signature 204 219 - -
Viun4g02702 380 PRINTS Disease resistance protein signature 278 292 - -
Viun4g02702 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 375 IPR027417 -
Viun4g02702 380 Pfam Rx N-terminal domain 11 102 IPR041118 -
Viun4g02702 380 Gene3D - 32 143 - -
Viun4g02702 380 PANTHER DISEASE RESISTANCE PROTEIN RP 43 374 IPR044974 GO:0006952
Viun4g02702 380 FunFam Probable disease resistance protein At1g61300 161 333 - -
Viun4g02702 380 Gene3D - 161 337 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02702 Viun-Chr4 41551111 41552605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02702 178 359 WRKY Transcription Factor Family AT4G12020 26.214 7.83e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02702 - - vun:114181814 594.734