Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02687 ATGGCAGCAGAAGTTGTTGGTGGTGCTCTTCTTTCGGCCTTTCTTCAGGTTGCATTCGACAGGCTGGCTTCTCCTCAATTCGTAGATTTCTTTCGTGGAAGAAAACTTGATGAGAAGCTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATGCTCTTGCTGATGATGCAGAACAGAAACAGTTCACAGATCCACACGTCAAAGCATGGCTTCTTTCTGTCAAGGAGGCTGTCTTTGATGCAGAGGATCTCTTGGGTGAAATAGATTATGAACTCACCAGATGCCAAGTGGAAGCTGGATCTGAACCTCAAACCTTTACTGACAAGGTATCAAATTTCTTCAACTCTACTTTCAGTTCATTTAACAAGAAAATTGAATCAGAGATGAAAGAAGTCCTACAAAAACTAAAATATCTTGAACAGCAAAAGGATGCTCTTGGTTTGAAAAACGGTACTTCTTATTCTGATAATAAGGTGTCACAGAAGTTGCCATCATCTTCTTTGGTGGTTGAAAGTATTATCTATGGCAGAGATGCAGACAAAGAAATTATCTTTAATTGGCTCAGATCTGAAACCGACAATGATAACCATCCATCTATATTTTCCATTGTGGGCATGGGTGGATTGGGTAAGACCACACTCGCCCATCATGTGTACCGTGACCCAAAGATGGAGGAGGCTAAATTTGATATCAAAGCTTGGGTTTGTGTTTCCGATCATTTTGATGTTTTGACAGTGACAAAAACAATTCTTGAGGCAATCACTAACTCTAAAGATGATAGCGGGAACCTAGAAATGGTTCATGGAAGATTGAAAGACGAAATATCAGGAAGGAAATTTCTTCTTGTTTTAGATGATGTTTGGAACGAAGGAGGAGAAGAATGGGAAGCTGTTCGAACTCCTCTTAGCTATGGGGCTCCAGGAAGTAAAATTCTTGTCACGGCACGTGCTGAGAAAGTTGCTTCTAACATGAGATCTAAAGTGCATCTCCTGAGGGAATTACGAGGGGATGAATGCTGGAATGTTTTTAAAAAACATGCATTAAAAGATGATGATCTTGAATTGAATGATGATCTAAAGGAGATTGGTAGAAGGATAGTTGAGAAGTGCAAAGGATTACCTCTTGCTTTGAAAACAATCGGATGTCTTCTCCGCACAAAGTCATCCATTTCATATTGGAAGAGTGTATTGGAAAACGACATATGGGAGTTGCCGAAAGAAGTGAAAATTATCCCTGCTCTATTACTGAGTTATCAACACCTTCCTTCTCATCTCAAGCGATGCTTTGCTTATTGTGCATTGTTTCCGAAAGATCATGAATTTGACAAGAAGGAATTAATTTTGTTGTGGATGGCTGAAGGTTTTCTCCATCACTCTCAACAAATCAATAATGTAGAAGAAATTGGTGAACAGTATTTCAATGATTTACTAACGAGGTCTTTCTTTCTTCAATCAGATTTCAAAACCTATTTCTCCATGCATGACCTTCTGAATGATTTGGCAAAATATGTTTGTGCAGATTTTTGTTTCAGGTTGAAATTTGATAAAGGAAACTGCATCCCCAAAAAAACTCGTCATTTTTCATTTGCATTCGATGACGTAGAATGTTTTGATGGTTTTGGGAGTTTCACTGATGCTAAAAGACTGCGTTCTTTTTTTCCATATGAAGAATTCGGGGGAAGAAATATTGATTATTATCCTTTGCAATTCAAGATTTTGGTACATGAATTGTTTTCCAACTTTAAATTTTTACGTGTCTTATCTTTGGATGGATATTCTGAGCTTAAAGAAGTCCCTGATTCTGTTGGTGATCTTAAACATCTCCATTCTTTAGACCTTTCGAGAACTGGGATACAAAAATTACCCGAATCAACATGTTTGCTCTATAACTTGCTAATCTTGAAGTTGAACTATTGTTTAAGTCTGGAGGAGTTGCCCTTAAATTTGCATAAACTCACCAAATTGCATTGTATTGAATTTGAAAATACAAAAGTAACAAAGATGCCAATGCATTTTGGAGAGTTGAAGAATCTTCAAGTACTCAGTCCGGTTTTTATCGATAAAAATAAGGAGTTTAGTACTAAGCATCTAGGATGCCTCAATCTTCATGGAAGACTATCAATTAATGAGGTGCAAAATATTGTAAATCCTGTAGATGCATTAGAAGCAAATCTGAAAAATAAAGATCTTGTGGAGTTAGAGTTAAAATGGGAGTCAGACCATATCCCTGATGATCCAAGGAAAGAAAAGAAAGTATTGGAGAATCTACAACCTTCCAAAATCGTGGAATATTTGTCAATAGAGAACTATGGTGGTACAGAATTCCCAAGTTGGGTATTTGATAATTCATTATCAAATTTGGTGTTCTTAAGGCTGGAGGACTGTAAATATTGTTTGTGTTTGCCTCCCCTTGGACTATTGTCATCTCTGAAGACCCTTGAGATTATTGGATTTGATGGAATAGTGAGCATTGGTGATGAATTTTATGGGAATAGCTCTTCTTCGTTTACATCTTTGGAAAGTTTGGCATTTTCAAAGATGAAGGAATTGGAAGAATGTGAACGTAAGACTGCTGCTTTTCCACGTCTTGAATATCTCGATGTGTATGAATGTCCCAAGCTAAAAGGTCTGCCAGATCAACTTGTTAATGTAAAGAATCTTTATATAAGGAAAGCATCGTGCCTCGAAAGGTGTGAGCATACTGTATCTCATAATTCACTTGAAGCCTTGACCTTTCTTGTTTTTCCAATTATGAATATTTCAATGAGTCGTAGCTTTGATCTGCTTGAAGAAATTCTCATCTTTGACAGTTGTGATTCTTTAACAACCTTTCCACTCGATTTCTTCCCAAACCTTAAGTATCTTTCATTGTGTTCCTGTCGTAACCTACAAATTATTTCACAGAAGCACACTCATAATCGTCTCAAGCATTTGACAATTCGCAGTTGCTCACGATTTGACTCATTTCCTAGTGAAGGTTTATCTGCTCCGCAGCTATTGTTTATTGATATTGATGGAGTGGAGAATTTGAAGTTGTTGCCAAAACGCATCAGAATCCTGCTTCCGTCTCTTTATATACTAAACATAATTAATTGTCCAAAAGTGGAGATGTTCCCAGACGGAGGTTTGCCACCATATGTAGGCCAAGTGTCTCTTTCAAGTTTGAAACTTATAGCCTCCCTAAAAGAGACCTTGGGTACCAACACATTTATGAAAAGATTGTGTATTGAAAATATAGATGTGGAGTTTTTTCCCGATGAAGTTTTGCTACCACACTCTATCACTTCTCTAGAAATCTGTCGCTGCCCAAATCTTAAAAAGATGGAGTACAAGGGTCTCTGCCACCTCTCCTATCTCAAACTTTATGACTGTCCCAACCTCCAATGCTTACCGGAGGATGGTCTCCCCAAATCCATCTCCTCTCTTCGGATCTGGAGCTGTCCATTGTTGGAACGACGTTGTCAGAATCCCGAAGGCCAAGACTGGAACAAGATTGCTCACATTGAAGACCTAAGTGTTCGCTCTAAAGTTTAA 3537 0.3808 MAAEVVGGALLSAFLQVAFDRLASPQFVDFFRGRKLDEKLLGNLNIMLHSINALADDAEQKQFTDPHVKAWLLSVKEAVFDAEDLLGEIDYELTRCQVEAGSEPQTFTDKVSNFFNSTFSSFNKKIESEMKEVLQKLKYLEQQKDALGLKNGTSYSDNKVSQKLPSSSLVVESIIYGRDADKEIIFNWLRSETDNDNHPSIFSIVGMGGLGKTTLAHHVYRDPKMEEAKFDIKAWVCVSDHFDVLTVTKTILEAITNSKDDSGNLEMVHGRLKDEISGRKFLLVLDDVWNEGGEEWEAVRTPLSYGAPGSKILVTARAEKVASNMRSKVHLLRELRGDECWNVFKKHALKDDDLELNDDLKEIGRRIVEKCKGLPLALKTIGCLLRTKSSISYWKSVLENDIWELPKEVKIIPALLLSYQHLPSHLKRCFAYCALFPKDHEFDKKELILLWMAEGFLHHSQQINNVEEIGEQYFNDLLTRSFFLQSDFKTYFSMHDLLNDLAKYVCADFCFRLKFDKGNCIPKKTRHFSFAFDDVECFDGFGSFTDAKRLRSFFPYEEFGGRNIDYYPLQFKILVHELFSNFKFLRVLSLDGYSELKEVPDSVGDLKHLHSLDLSRTGIQKLPESTCLLYNLLILKLNYCLSLEELPLNLHKLTKLHCIEFENTKVTKMPMHFGELKNLQVLSPVFIDKNKEFSTKHLGCLNLHGRLSINEVQNIVNPVDALEANLKNKDLVELELKWESDHIPDDPRKEKKVLENLQPSKIVEYLSIENYGGTEFPSWVFDNSLSNLVFLRLEDCKYCLCLPPLGLLSSLKTLEIIGFDGIVSIGDEFYGNSSSSFTSLESLAFSKMKELEECERKTAAFPRLEYLDVYECPKLKGLPDQLVNVKNLYIRKASCLERCEHTVSHNSLEALTFLVFPIMNISMSRSFDLLEEILIFDSCDSLTTFPLDFFPNLKYLSLCSCRNLQIISQKHTHNRLKHLTIRSCSRFDSFPSEGLSAPQLLFIDIDGVENLKLLPKRIRILLPSLYILNIINCPKVEMFPDGGLPPYVGQVSLSSLKLIASLKETLGTNTFMKRLCIENIDVEFFPDEVLLPHSITSLEICRCPNLKKMEYKGLCHLSYLKLYDCPNLQCLPEDGLPKSISSLRIWSCPLLERRCQNPEGQDWNKIAHIEDLSVRSKV 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02687 1178 PANTHER DISEASE RESISTANCE PROTEIN RP 69 856 IPR044974 GO:0006952
Viun4g02687 1178 Gene3D Ribonuclease Inhibitor 688 903 IPR032675 -
Viun4g02687 1178 Pfam NB-ARC domain 181 399 IPR002182 GO:0043531
Viun4g02687 1178 Gene3D - 334 417 IPR042197 -
Viun4g02687 1178 Gene3D - 34 144 - -
Viun4g02687 1178 SUPERFAMILY L domain-like 932 1167 - -
Viun4g02687 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 433 IPR027417 -
Viun4g02687 1178 Gene3D - 418 504 IPR036388 -
Viun4g02687 1178 PRINTS Disease resistance protein signature 275 289 - -
Viun4g02687 1178 PRINTS Disease resistance protein signature 201 216 - -
Viun4g02687 1178 PRINTS Disease resistance protein signature 948 964 - -
Viun4g02687 1178 PRINTS Disease resistance protein signature 371 385 - -
Viun4g02687 1178 Coils Coil 123 143 - -
Viun4g02687 1178 Gene3D Ribonuclease Inhibitor 904 1174 IPR032675 -
Viun4g02687 1178 Gene3D - 154 333 IPR027417 -
Viun4g02687 1178 Pfam Rx N-terminal domain 11 103 IPR041118 -
Viun4g02687 1178 FunFam Probable disease resistance protein At1g61300 158 330 - -
Viun4g02687 1178 Gene3D Ribonuclease Inhibitor 545 684 IPR032675 -
Viun4g02687 1178 SUPERFAMILY L domain-like 494 889 - -
Viun4g02687 1178 FunFam Probable disease resistance protein At1g63360 419 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02687 Viun-Chr4 41421604 41425674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02687 203 647 WRKY Transcription Factor Family AT5G45050 23.922 6.93e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02687 - - vra:106774688 1585.47