Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02663 ATGGCAATTCCATCACACATAAAAGCTTGGGTTTATTCAGAATATGGAAACATAGAAGAGACTCTCAAATTTGAAACCGACATACCTATACCACAGTTCAAGGAAGACGAGGTGCTCATTAAGGTTGCTGCTGCAGCCCTTAATCCCATAGATTATAAGAGAGCTCTTGGCTTTTTCAAGAACACCGACTCTCCCTTACCTACTGTTCCGGGGTATGATGTTGCTGGTGTGGTGGTGAGAGTGGGAAGTGAAGTGAGAAAATTCAAGGTTGGGGATGAGGTTTATGGTGACATCAATGAGAATCCTAGAATCAATCCCAAAAGGATTGGATCTTTGGCAGAGTATACTGCTGTTGAAGAGAAAGTGTTGGCTCACAAACCTTCCAATTTGAGCTTTGCTGAAGCTGCATCCCTTCCTTTAGCCATCATCACTGCTTATCAAGGACTTGAAAGAGTTGAGTTTTCTGCTGGCAAATCTGTTCTTGTTATTGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGCTAGCGAAGCAGGTTTTTGGGGCATCAAAGGTTGCAGCCACAGCGAGTACTGGGAAACTGGATTTGTTAAGGAACTTGGGAGCAGACTTAGCCATTGATTATACAAAGGGGGAGCTTGAAGAGCTGGAAGAAAAGTTTGATGTGGTGTACGATACAGTAGGGCAGAGTGAGATCGATAGAGCATCGAAGGCTGTTAAGGAAGGTGGAAAATTTGTGACAGTAGCAGCACGTGGAAGTTCTTCTGCTATCTTCGTAATGCGCATTTCGGATGGTACTGTGTTGGAGAAACTAGAACCTTATTTGGAGAGTGGGAAGGTGAAGCCAATATTGGATCCTAAAAGTCCATTTTCGTTTTCTCAGGCTGTGGAGGCATTTGCATATTTGAAAACTAACAGAGCCATTGGAAAAGTGGTGATACATCCCATCCCTTGA 957 0.4378 MAIPSHIKAWVYSEYGNIEETLKFETDIPIPQFKEDEVLIKVAAAALNPIDYKRALGFFKNTDSPLPTVPGYDVAGVVVRVGSEVRKFKVGDEVYGDINENPRINPKRIGSLAEYTAVEEKVLAHKPSNLSFAEAASLPLAIITAYQGLERVEFSAGKSVLVIGGAGGVGSLVIQLAKQVFGASKVAATASTGKLDLLRNLGADLAIDYTKGELEELEEKFDVVYDTVGQSEIDRASKAVKEGGKFVTVAARGSSSAIFVMRISDGTVLEKLEPYLESGKVKPILDPKSPFSFSQAVEAFAYLKTNRAIGKVVIHPIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02663 318 CDD MDR_like_2 8 314 - -
Viun4g02663 318 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 318 IPR044626 GO:0016628
Viun4g02663 318 Pfam Zinc-binding dehydrogenase 201 314 - -
Viun4g02663 318 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 157 178 IPR002364 GO:0008270|GO:0016491
Viun4g02663 318 Gene3D - 14 314 - -
Viun4g02663 318 SUPERFAMILY GroES-like 2 162 IPR011032 -
Viun4g02663 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 130 258 IPR036291 -
Viun4g02663 318 Pfam Alcohol dehydrogenase GroES-like domain 36 97 IPR013154 -
Viun4g02663 318 Gene3D - 149 265 - -
Viun4g02663 318 SMART PKS_ER_names_mod 16 314 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02663 Viun-Chr4 41242379 41244190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02663 60 250 Monolignol Biosynthesis Gene Families AT1G72680 28.182 1.09e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02663 K18980 - gmx:100793908 497.664