Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02611 ATGGCTTCTAGAATTCTTTCCACTCTGCATAATGTGTCTTCTTCTTCTTCTTCTTTTGTCTCAACCACTAAACGTTGCTTAGGTCTATGTTGTCTCTGGCATAGAAGTTTAAGTGGAACTGGTGCCTCTGTTGCTGCTGATATAGAGCCTAGCAAGCCACCAGTGCAAATTGAACATAATCAGCTTCTGATTGATGGAATGTTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCAATGATCCTAGGACTGGAGATACAATTGCCAAAGTAGCTGAAGCGGATGTTGAAGATGTAAATCGCGCTGTACGTGCAGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGCTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGATCATACCATGTTCAAACCTTGCATGAACCTATTGGAGTAGCAGGGCAGATTGTTCCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTAATACAGTTGTAATGAAAACTGCAGAACAGACACCACTTTCTGCCATTTATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTACTGCTGGTGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTGAGACAGGTAGAAGGGTATTAGAACTCTCAGCACGCAGTAACCTGAAGCCAGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGATGCTGATATTGATGCAGCTGTTGAAGCGGCACATTCTGCATTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGGCTAAAGCTCGTGCTACTAAACGTGTAGTTGGAGACCCTTTTAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTTTGCACAATTCGAGAAGATCCTGAAATACATAAGATCAGGCATTGAAAGTGGTGCTACACTGGAATCTGGTGGTCAAAGAGTTGGCTCAAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGTTCAGGACGACATGTTGATAGCAAAAGATGAGATATTCGGTCCGGTACAATCTATCCTGAAATTCAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTCATTATGGCCTGGCTGCTGGAGTTTATACTCGGAATATAGACACTGCCAATACCTTGATGAGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTGTTTGATGCAGCAATACCTTTTGGTGGATATAAAATGAGTGGTCAAGGAAAAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTCTGTCACTGCTCTTAAGAATCCTGCATGGCTCTAG 1623 0.4264 MASRILSTLHNVSSSSSSFVSTTKRCLGLCCLWHRSLSGTGASVAADIEPSKPPVQIEHNQLLIDGMFVDAASGKTFPTNDPRTGDTIAKVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSRIILRCADILEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGNTVVMKTAEQTPLSAIYVSKLFLEAGLPPGVLNVISGFGPTAGAALCTHMDVDKLAFTGSSETGRRVLELSARSNLKPVTLELGGKSPFIVCKDADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARATKRVVGDPFKSGVEQGPQIDFAQFEKILKYIRSGIESGATLESGGQRVGSKGYYIEPTVFSNVQDDMLIAKDEIFGPVQSILKFKDLEEVIRRANATHYGLAAGVYTRNIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGKVRGIYSLRSYLQVKASVTALKNPAWL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02611 540 Coils Coil 89 109 - -
Viun4g02611 540 FunFam Mitochondrial aldehyde dehydrogenase 2 312 501 - -
Viun4g02611 540 SUPERFAMILY ALDH-like 56 532 IPR016161 GO:0016491
Viun4g02611 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 529 - -
Viun4g02611 540 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 64 320 - -
Viun4g02611 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Viun4g02611 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Viun4g02611 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 528 IPR016162 GO:0016491
Viun4g02611 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Viun4g02611 540 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Viun4g02611 540 CDD ALDH_F2BC 57 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02611 Viun-Chr4 40883020 40887528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02611 1 540 Aldehyde Dehydrogenase Gene Family AT3G48000 72.222 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02611 K00128 - gmx:100798892 961.059