Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02610 ATGGCTTCTAGAATTCTTTCCACTCTGCATAATGTGTCTTCTTCTTCTTCTTCTTTTGTCTCAACCACTAAACGTTGCTTAGGTCTATGTTGTCTCTGGCATAGAAGTTTAAGTGGAACTGGTGCCTCTGTTGCTGCTGATATAGAGCCTAGCAAGCCACCAGTGCAAATTGAACATAATCAGCTTCTGATTGATGGAATGTTTGTTGATGCAGCTTCTGCAACTTTTGTTCTGTCAGGAAAAACTTTTCCAACCAATGATCCTAGGACTGGAGATACAATTGCCAAAGTAGCTGAAGCGGATGTTGAAGATGTAAATCGCGCTGTACGTGCAGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGCTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGATCATACCATGTTCAAACCTTGCATGAACCTATTGGAGTAGCAGGGCAGATTGTTCCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTAATACAGTTGTAATGAAAACTGCAGAACAGACACCACTTTCTGCCATTTATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTACTGCTGGTGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTGAGACAGGTAGAAGGGTATTAGAACTCTCAGCACGCAGTAACCTGAAGCCAGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGATGCTGATATTGATGCAGCTGTTGAAGCGGCACATTCTGCATTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGGCTAAAGCTCGTGCTACTAAACGTGTAGTTGGAGACCCTTTTAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTTTGCACAATTCGAGAAGATCCTGAAATACATAAGATCAGGCATTGAAAGTGGTGCTACACTGGAATCTGGTGGTCAAAGAGTTGGCTCAAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGTTCAGGACGACATGTTGATAGCAAAAGATGAGATATTCGGTCCGGTACAATCTATCCTGAAATTCAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTCATTATGGCCTGGCTGCTGGAGTTTATACTCGGAATATAGACACTGCCAATACCTTGATGAGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTGTTTGATGCAGCAATACCTTTTGGTGGATATAAAATGAGTGGTCAAGGAAAAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTCTGTCACTGCTCTTAAGAATCCTGCATGGCTCTAG 1641 0.426 MASRILSTLHNVSSSSSSFVSTTKRCLGLCCLWHRSLSGTGASVAADIEPSKPPVQIEHNQLLIDGMFVDAASATFVLSGKTFPTNDPRTGDTIAKVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSRIILRCADILEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGNTVVMKTAEQTPLSAIYVSKLFLEAGLPPGVLNVISGFGPTAGAALCTHMDVDKLAFTGSSETGRRVLELSARSNLKPVTLELGGKSPFIVCKDADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARATKRVVGDPFKSGVEQGPQIDFAQFEKILKYIRSGIESGATLESGGQRVGSKGYYIEPTVFSNVQDDMLIAKDEIFGPVQSILKFKDLEEVIRRANATHYGLAAGVYTRNIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGKVRGIYSLRSYLQVKASVTALKNPAWL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02610 546 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 535 - -
Viun4g02610 546 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 340 351 IPR016160 GO:0016491
Viun4g02610 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 312 319 IPR029510 GO:0016491
Viun4g02610 546 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 64 328 - -
Viun4g02610 546 Pfam Aldehyde dehydrogenase family 81 535 IPR015590 GO:0016491
Viun4g02610 546 CDD ALDH_F2BC 57 538 - -
Viun4g02610 546 Coils Coil 95 115 - -
Viun4g02610 546 SUPERFAMILY ALDH-like 57 538 IPR016161 GO:0016491
Viun4g02610 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 318 507 IPR016163 GO:0016620
Viun4g02610 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 80 535 IPR016162 GO:0016491
Viun4g02610 546 FunFam Mitochondrial aldehyde dehydrogenase 2 318 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02610 Viun-Chr4 40883020 40887528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02610 1 546 Aldehyde Dehydrogenase Gene Family AT3G48000 71.429 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02610 K00128 - gmx:100798892 954.51