Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02604 ATGGCAAGAGAATGGTCCTTTTACAGAGATTTTCTGCCAATTTTGGTGCTTCTTGGCACCGAATGCAATGACATGGGTTTACTCACACTCTTCAAAGTAGCCTCACTGCAAGGATTGAACAGCTATGTCTTTGTGGCCTATGCTTATACTGTTGCAACCACTGTGCTTCTTCCAATCACTTTTTTCCACAGAAGATCAAGAGTGGTTCCTCCACTGAGTTTCTCCACAGTATCCAAAATAGTTCTTCTTGGGGTGATAGGAAGTTCATCTCAGATACTGGGTTATGCAGGAATCAGCTATAGTTCTCCAGCTCTTGCTTCTTCAATTGGAAATCTGGTGCCTGCTTTCACCTTCATCCTTGCTGTGATGTGCAGGATGGAAAAGTTAGCTGCTAAAAGTAGGAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATATCAGGTGCATTTGTATTGACTTTCTACAAAGGACCATCAATCTTCAATGCTCACAAACATGTTTCCTTGTCACCTCAAGATCCAATTAACTTTCTTAAATCAGAGGATGCTAGCTGGGCCACTGGTGGCATTCTGCTCATAGCTGATTACATTCTGACTTCAGTATGGTACATTTTAGAGGAGGATATCTTGAGAGTGTTCCCGGAGGAACTTACTCTAGTCTTGTTTTACAATGTCACTGCCACAATATTCACTGCAACTGTAGGTTTACTTGCTGTGCCAAATGCTAGTGCTTGGAAAATAGGTCTAAATGTTTCACTGATCTCTATTGTTAGCTCAGGACTATTTGGAAAGTTAATGAGCAATGTAATTTATGCCTGGACACTGAATTTAAAGGGGGCTGTCTTTGTAACATCCTTGAGGCCACTTCAAATTGTGATTGCAGTTGCAATGGGTGTTGTGTTCCTTAATGATACTCTGTACATTGGAAGCGTAGTTGGAGCAATAATAGTATCAATTGGCCTTTATGTTGTATTGTGGGGCAAGGCAACAAAAGAGATAGAGGAAATTGTTGGTGGCTTGGAATCACCAACTGCAGAGAATGTTCCTCTCTTGCAAAACCAGAGAACTGAAACATCAGAAAAGAATGTTTAA 1095 0.4082 MAREWSFYRDFLPILVLLGTECNDMGLLTLFKVASLQGLNSYVFVAYAYTVATTVLLPITFFHRRSRVVPPLSFSTVSKIVLLGVIGSSSQILGYAGISYSSPALASSIGNLVPAFTFILAVMCRMEKLAAKSRSSQAKVMGSIISISGAFVLTFYKGPSIFNAHKHVSLSPQDPINFLKSEDASWATGGILLIADYILTSVWYILEEDILRVFPEELTLVLFYNVTATIFTATVGLLAVPNASAWKIGLNVSLISIVSSGLFGKLMSNVIYAWTLNLKGAVFVTSLRPLQIVIAVAMGVVFLNDTLYIGSVVGAIIVSIGLYVVLWGKATKEIEEIVGGLESPTAENVPLLQNQRTETSEKNV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02604 364 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016020|GO:0022857
Viun4g02604 364 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Viun4g02604 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 329 - -
Viun4g02604 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02604 Viun-Chr4 40823180 40827389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02604 1 358 Nodulin-like Gene Family AT3G28050 45.308 4.45e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02604 - - gmx:100790743 553.903