Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02602 ATGGATAGAAGGTACTGTTACAAGGATCTGCTTCCTCTGGTGGTTCTTGTTGCCAATGAATGCAATAACACAGCTTTGTTCACTCTCTTCAAAGCAGCCACACTGCAAGGAATGAGTAGCTATGTCTTTGTTTCCTATGCCTATTCCTTGGCCTTTCTTGTTCTTCTTCCTATTACTTTTCTCTACAGAAGATCAAGAGTGGTTCCTCCTCTCAATTTTTCCATCTTATCCAAAATTGCTCTTCTGGGACTCATAGGGTGTTCATCTCAGATTCTGGGGTATGTTGGGATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCTTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATTGCCATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCGATATCAGGTGCATTTATTGTGACTTTCTGCAAAGGCCAATCGATCATCTTCGCTGATAATTCGCCTTCAATTCAACTTTCACAATCAAATGCCATTCTTGCTTCAGTAGATAGAAATTGGGCCTTTGGTGGTCTTCTGCTCACAGCTTGCAATATATTGCTTACTATATGGTTCGTTTTTCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTATGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGCGGAGAAAAATTCAAGTGCATGGAAAATAAGACCAGACATATCCCTGATATCTATTGTTTGCACTGGAATATTTAACAAGTTCTTGAGTAGTGCAATCTATGCCTGGGGAATACACTTGAAGGGGCCTGTATATGTAGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATGTTGGAAGTTTGATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGAAGATGTTGGTAGCCAGGAATCACCAATCACTGAGAATGTTCCTCTCTTGCAAACCTATGAAACTGTAAATTCTACAAAGAAAACAGATGCAAGAGTATAA 1110 0.4027 MDRRYCYKDLLPLVVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPITFLYRRSRVVPPLNFSILSKIALLGLIGCSSQILGYVGISYSSPTLSSAISNLTPAFTFILAVICRMEKIAIRSRTTQAKIWGSIISISGAFIVTFCKGQSIIFADNSPSIQLSQSNAILASVDRNWAFGGLLLTACNILLTIWFVFQVEILKEFPDELTMVFFYNLYAAIVASIVGLIAEKNSSAWKIRPDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYVGSLIGGTVISIGFYTVMWGKATEQKEEEEDVGSQESPITENVPLLQTYETVNSTKKTDARV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02602 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 329 - -
Viun4g02602 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 154 - -
Viun4g02602 369 Pfam EamA-like transporter family 26 153 IPR000620 GO:0016020
Viun4g02602 369 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Viun4g02602 369 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02602 Viun-Chr4 40814008 40817735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02602 1 358 Nodulin-like Gene Family AT3G28050 49.593 4.09e-120 350