Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02581 ATGGCGGAAGGATTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCGTGGAACATTCTCGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAGTCGCGCCCTCACATAACGCTCTTCTCCGCCCCCTTTCTAGAACCTTCCAAGCTCGAATCGCTTCTCAGAACCTTCGCATCCAAGCACGATCCTCTCTTTCTCTCCTTCTCCTCCGTCGGCACCTTCCCCAACCACGCCGACAACCTCCTCTTCCTGGCGCCCACGCCCTCCCTCTCCCTCCTCCAATTCCAGTCCCACCTCTGCGACGCCATCAGAAAAGAAGGTATTGAGATCTCCGACGACTTCGCCTTCAATTCCTGGATACCTTACTGCTCGGTTGCACACCATGTCCCCAAAAACAGAATGCCCGAGGCTTTCTCTCTTTTGCGGGAACTCAAACTGCCGGTTTCCGGTTACGCTACGGAAATCGCACTCGTGCAGTTCTCTCCGGTTCGTGAACTCTTCTCCTTTGTGCTCAGCAACAATGTAGATTCCTGA 555 0.5477 MAEGFAIELYLDPALENQVLKAWNILARRQITTHLIEMESRPHITLFSAPFLEPSKLESLLRTFASKHDPLFLSFSSVGTFPNHADNLLFLAPTPSLSLLQFQSHLCDAIRKEGIEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATEIALVQFSPVRELFSFVLSNNVDS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02581 184 PANTHER - 1 182 - -
Viun4g02581 184 SUPERFAMILY LigT-like 5 167 IPR009097 -
Viun4g02581 184 Gene3D Cyclic phosphodiesterase 5 178 - -
Viun4g02581 184 Pfam 2'-5' RNA ligase superfamily 41 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02581 Viun-Chr4 40671275 40672123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02581 1 184 Calmodulin-binding Proteins AT5G40190 60.870 2.20e-78 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02581 - - pvu:PHAVU_004G019100g 353.984