Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02579 ATGCATGGGTGTGGTGGTGACCAGTGGAAACACAATCGGCACATGTGGCCTGTACCTGCTAACGCGACCACTGATGGACGCAAGATTCGCGCCGGTGATTGTGCACTCTTCAAGCCACCTAGGGACTCCCCTCCTTTTATTGGAATAATTCGCAAGTTATCTTATGATAAACAAGAAAGTCCAAGTTTAGAAGTACATTGGCTTTACCGACCTGCTGATTTAAAACTCGCTAAAGGAATTGTGCTGGAAGCTGCACCGAACGAAGTTTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTCGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTCGACGAGTTTATGACATTGAGAACAACTGTTTATGGTGGCTAACTGATAAGGACTACCTTAATGAACAACAGGAAGAAGTTAACCAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAGCATCAACACAGTCTTTGAAATCTGGTTCTGACAATATACAAAATAGTTCTTCGTTTGGTGCACAGGGTAAGGGTAAAAAGAGAGAGCGGGGTGATCAGGGTTCTGATTCATCTAAAAAGGAGCGGTTATTTAAGATAGAAGATGGAGATTCTGGTCAGTTTAGACCGGAGAGCATGTTAAAGTCCGAGATTGCTAAAATAACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAAACTGGTACAGCTTATGCAGCCTGACAGTGCTGATAAAAAGATTGATTTACCTGGGCGGATAATGCTTGTTGATGTAATTGCACTTACAGACCGGTACGACTGTCTGGGCTGGTTTGTACAGCTTAGGGGTTTACCTGTATTGGATGAATGGCTGCAGGAGGTCCATAAGGGAAAAATTGGTGATGGAAATCCCAAAGAAAGTGACAAGTCTGTTGATGATTTTTTGTTAGCTTTACTGCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAGACCTGTAATGTTGGTAAGTCTGTCAATCATTTACGCACGCACAAGAATGCTGAAATTCAGAGGAAAGCCCGGAGTTTAGTGGACACATGGAAGAGGCGTGTGGAAGCTGAAATGAACATGAATGATTCAAAGTCTGGTTCAAACCGTGCTGTTTCTTGGCCAGCAAAGCCAGCAAACTCGGAGTCTCCTCATGTTGGAAATAGGAAAACAGGCGGATCCTCTGATAACGTTGTGAAGAGCTCCGCAATTCAACCCTCATTATCTAAAAGTTCCCAATCTAAGTTAAGTTCTGGAGAAGCTTTGTCGAAGTCTTCATCTCCTGCCTCTACTAAATCATCGACTACCCCAGCAGGCGTGAACTCAAAAGATCAAAACAGTAAATTCTTTGTTGCTGCAACGTCAGATCTACCTCTGACACCTATCAAAGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAATAACAGTATAACTTGTTCTAGTGAACATGCTAAGACTATTGGTTCTTGCAGGGAAGATGCAAAGAGCTCTACTGCAGTGTCAATGAGTGGAAGTAAAATTCATGGTTGTACATCTCGAACTCGCAAGTCAAGCAATGGCGTACATGGGGGGGCTGGTACCGCGGTAGGTCAAAAGGAGCACAACTCTGCAAAACACGCAACCAGAAATTCACCTTCTGAGAAAGTATCACCAACTCGAGCATCCCATGAAAAATCAATTGACCAGGCCCTTGCCGATCAAGGGAATAACCAGCGACTGATTCTTAGGTTGCCAAACACCGGTCGCAGTCCTTCAAGGGGAGCTAGCGGGGGCTCTTTTGAAGAACCAGCTACAACGAGCAGCAAAGCTTCATCTCCTGCTGACCGGAATGATAATCAGGACAGAAGAGTGAAAACTAAGGCCGAGTGTTTACTGACCCATGTGTCAAATATGATGAATGAGGCTTGTGATGCTAATGATGCTTTGATTGGTGATGAAGGTAAGGGTACTCCAATAGTTGATGAGCGAAGCAGGGCAAATGAAGATAGTGATAAGGTATTAGAAACATCAAAGCCAACTAGTTTGCCATCTGGGTTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCGTTAGTTGAAAGCTGTGTAAAGTTTTCTGAAGCAAGTTCATCCGTTTCCCATGGAGACGATGGGATGAACCTACTAGCCACTGTGGCTGCTGGGGAAATATCCAGATCTGAAAATGCGTCACCTGTGGCATCCCCTGAGAGAAAGTCTCCTGCAGCAGATGAAATGTGCTCAGGCAATGATTTGAAGTTAAAGCATTCTGGTGAAGCAGCTGTTCGCACTCTTTCGGAGTTGAATGGTAGGGCTACAGGGGAGCATCCTTTGAATACAGTTGATTCATTGCAGATAAAGAATGAGTTGAGGCATCCTGCCATGACTCTGTCACGTGATTTTTCAGGGGATGGTGAAACCATTTCATCCCATGACACTCATATAAATGTCTCCCCTACAAATTTGTCACAAAATGTTGAAGGTCCATGCTTACGGACCGAAACCAAAGAAGATACTTCTGTTACTATACTGACAGCAAAAAAGGAGAGTAATGCAGACGCTGAAGTTTCAGACTCTAAATTAATGCCAAGGGCCTCCTCCTTGGATGATGATCAGAAGGTTGATCACATGAGTGAGGAGATCATTGAGGATGAGAAAATGTTGGTTTCAAAACCTGTTACAAATGTTGAGTCAGAAAACGTATCTGGTGAAAAGCAGCCGGAGTTAACTTCAGGTGTGGTGGATAATGAGAACCAGATTAGTGTGGAGAAAGCAACAGGTACTGGAATACTAGTGCAAAAGGCCTCTCCAATTGCTGAAAACTGTGAGTCTGCATATTTAAAAAAGGAGTCACCTGCTTCTGGCAATGCTTTAATTGTACCCAAGGATGAAAGTGCCGATGACATGAAGTCAGTTGTGATTGAGCCTGATGTAAGACCTATCGAGCAGGATTCTTCTGCTCCAGATGATTCTAATGAATGTGCTGAAGTTAATATGGGCAGAAAAGAAACCATTGGTCAGTGTTCTGGTTCATCAGTTCAGCCAGATTTACAAGCAATGGCTAGGACAGAGAGTGAAGTGTCCAAATCATGTGAGCAAAAGCTTGATGCAAACCCGTCTGAAGTTTCAGGAGAGAGGCATGCATGCTCTACAGCTGGTGCTGATGCAGCTGTAAAACTTGACTTTGATTTAAATGAAGGCTTTCCTGTTGATGATGTAAGCCAAGGGGAGATTGCCAGACAGGATGATCCTATCACATCATCTGCAGTTCATGTTCCTTGCCCGTTGCCTTTTCCTATTTCGTCCATCTCTGGTGGCTTCCACCCTTCAATTACTGTTGCATCCGCTGCTAAAGGGCCGGTTGTTCCACCAGAAAACCCATTGAGGATCAAGGGGGAGCTTGGATGGAAAGGATCTGCCGCTACCAGTGCATTTCGACCAGCTGAACCTAGGAAAAATACTGAGATGCAGTCCTCTACTAATGATATTACTTCTGTTGATGTCACTTCTATCAAACAAAATCGCCCCCCCTTAGATTTTGACTTGAATGTGGCAGATGAGAGATGTTTTGAAGATGTTGGTTCACATGGTTCTTTAGATTCTGGACCGCATGATCGTAGTGTGGGTCTTGATCTCGATTTAAACAGAGTTGATGAGACTCCTGAAATTGGTACTTTCTCTATAAGCAAACTGGATATTCCTGCTTTACCAAGCAAGCCGTCATTGTCTAGTGGGTTGTCTAATGGTGGAAGTGTCTCAAGAGACTTTGACTTAAATAACGGGCCTGGCCTTGAAGAAGTTGGTAGTGAAGTCCCTATACGTAGTCAGCAGATGAAAAATTCTGTGCCGTTTCCAAGTGCTGTTCATAGCACGAGAACAAACAGTGCTGAATATGGAAATTATTCTGCATGGTTTCCTCCTGGCAATTCCTATTCTGCAATTACTGTCCCGCCACTTCTATCTGGTAGAGGGGAGCAGAGTTATGTTACTGGTGCCGGGGCACAACGAATAATGGGTCCAACAGGTAGCACACCTTTTGGTCCTGAAATCTACAGGGGATCAGTACTTTCATCCTCACCGGCTGTTGCTTATCCGTCCACTACAGCTTTTCCATATCCTGGATTTCCATTTGAAACCAATTTTCCATTATCCTCAAACTCCTTTTCTGGTTCAAATGCATTTATGGATTCGTCGAATGTGGGCGGGCTATGTTTTCCTACCATGCCTACACAGCCAGTGGGGCCTGGTGGTGTCGTTTCATCCACATATCCTCGTCCATATGTCATGAGTCTTCCAGGTGGTACTAGTAATGTGATACCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGTAGCAGATACAGAACGGAGGGACGAAAGATTGCCCTCAGGATTGAGGCAAATGTCTGTCCCGAACCCACAACCCTCAATTGAGGACCACTTGAAGATGTTTCAGATGGCAGGGGCTGCTGCATTGAAAAGAAAAGAGCCTGATGGTGGTTGGGATGCTGAAAGATTCGGTTATAAGCAACACTCACGGCAATAG 4689 0.4449 MHGCGGDQWKHNRHMWPVPANATTDGRKIRAGDCALFKPPRDSPPFIGIIRKLSYDKQESPSLEVHWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNEQQEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPASTQSLKSGSDNIQNSSSFGAQGKGKKRERGDQGSDSSKKERLFKIEDGDSGQFRPESMLKSEIAKITDKGGLVDFEGVEKLVQLMQPDSADKKIDLPGRIMLVDVIALTDRYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNPKESDKSVDDFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNAEIQRKARSLVDTWKRRVEAEMNMNDSKSGSNRAVSWPAKPANSESPHVGNRKTGGSSDNVVKSSAIQPSLSKSSQSKLSSGEALSKSSSPASTKSSTTPAGVNSKDQNSKFFVAATSDLPLTPIKEERSSSSSQSQNNSITCSSEHAKTIGSCREDAKSSTAVSMSGSKIHGCTSRTRKSSNGVHGGAGTAVGQKEHNSAKHATRNSPSEKVSPTRASHEKSIDQALADQGNNQRLILRLPNTGRSPSRGASGGSFEEPATTSSKASSPADRNDNQDRRVKTKAECLLTHVSNMMNEACDANDALIGDEGKGTPIVDERSRANEDSDKVLETSKPTSLPSGFVSRSGQTYDASLSPMNALVESCVKFSEASSSVSHGDDGMNLLATVAAGEISRSENASPVASPERKSPAADEMCSGNDLKLKHSGEAAVRTLSELNGRATGEHPLNTVDSLQIKNELRHPAMTLSRDFSGDGETISSHDTHINVSPTNLSQNVEGPCLRTETKEDTSVTILTAKKESNADAEVSDSKLMPRASSLDDDQKVDHMSEEIIEDEKMLVSKPVTNVESENVSGEKQPELTSGVVDNENQISVEKATGTGILVQKASPIAENCESAYLKKESPASGNALIVPKDESADDMKSVVIEPDVRPIEQDSSAPDDSNECAEVNMGRKETIGQCSGSSVQPDLQAMARTESEVSKSCEQKLDANPSEVSGERHACSTAGADAAVKLDFDLNEGFPVDDVSQGEIARQDDPITSSAVHVPCPLPFPISSISGGFHPSITVASAAKGPVVPPENPLRIKGELGWKGSAATSAFRPAEPRKNTEMQSSTNDITSVDVTSIKQNRPPLDFDLNVADERCFEDVGSHGSLDSGPHDRSVGLDLDLNRVDETPEIGTFSISKLDIPALPSKPSLSSGLSNGGSVSRDFDLNNGPGLEEVGSEVPIRSQQMKNSVPFPSAVHSTRTNSAEYGNYSAWFPPGNSYSAITVPPLLSGRGEQSYVTGAGAQRIMGPTGSTPFGPEIYRGSVLSSSPAVAYPSTTAFPYPGFPFETNFPLSSNSFSGSNAFMDSSNVGGLCFPTMPTQPVGPGGVVSSTYPRPYVMSLPGGTSNVIPDSRKWGSQSLDLNSGPGVADTERRDERLPSGLRQMSVPNPQPSIEDHLKMFQMAGAAALKRKEPDGGWDAERFGYKQHSRQ 1562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02579 1562 MobiDBLite consensus disorder prediction 685 704 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 1541 1562 - -
Viun4g02579 1562 Gene3D - 20 240 IPR043151 -
Viun4g02579 1562 ProSiteProfiles BAH domain profile. 27 142 IPR001025 GO:0003682
Viun4g02579 1562 Pfam TFIIS helical bundle-like domain 341 390 IPR017923 -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 205 236 - -
Viun4g02579 1562 CDD TFIIS_I 316 391 - -
Viun4g02579 1562 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 296 404 IPR035441 -
Viun4g02579 1562 SMART BAH_4 27 142 IPR001025 GO:0003682
Viun4g02579 1562 MobiDBLite consensus disorder prediction 177 204 - -
Viun4g02579 1562 Pfam BAH domain 29 134 IPR001025 GO:0003682
Viun4g02579 1562 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 259 394 IPR035441 -
Viun4g02579 1562 ProSiteProfiles TFIIS N-terminal domain profile. 308 393 IPR017923 -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 419 478 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 677 718 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 1484 1524 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 165 237 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 598 643 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 496 557 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 393 478 - -
Viun4g02579 1562 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1562 - -
Viun4g02579 1562 SMART TFS2_5 314 392 IPR003617 GO:0005634
Viun4g02579 1562 MobiDBLite consensus disorder prediction 495 652 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 1543 1562 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 396 411 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 768 787 - -
Viun4g02579 1562 MobiDBLite consensus disorder prediction 1182 1201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02579 Viun-Chr4 40652186 40659368 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Viun4g02579 BAH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02579 - - gmx:112998769 2473.35