Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02554 ATGGATTTGTTCCTTGCGAATACCCTAAACACCACTGTACTTGCACTCTTTTCTCTAACATTACTCTTAGCTTTCTCTCTGTTTCTCTTTCGTCCCTCCAAAGCTGGTCGTAATAATCTGCGAGAACCTCCAATGGCCTCACGTGCATGGCCCATACTCGGCCACCTCATGCTTCTCGGGGGCTCACCAACACCCCACAAGACGTTGGCAGCCATGGCTGACAAGTATGGACCCCTCTTCACCATCAAGCTCGGTTCCAAACGCGCTTTGGTTCTCAGCAACTGGAAAATGGCGAAGGAATGTTACACCACAAACGACGTCGTCGTATCCTCTCGCTCCAAGCTCGTGGCCATCGAACACGTTGCTTACAACCAAGCAAGTTTCGGGTTCGCACCCTATGGTCCTTACTGGCGTGAGATACGGAAGATTGTGACCGTGTTCCTCTCCGACCGCAAAACGGAGCTTCTAAGCCGCGTTAGGGTTTCTGAGATTCGAAGTTCTGTTAAAGAGCTCTTTCATGTTTGGTCGGAGAAGAAGGGGAGTGATGAGTGCGTGGTGGTGGAGATGAAGCAGTGGTTCACTGAGTTGGTGTTCAATATAGTTTTCCAAACCATGGCTGGGAAGCGATTATTCGGTAAAAGCGCAGTGGTTAGTGAGAAAGAAGCAGAGAAGTGTGTGAAGGCTTTGAGGGAGTTCATGCACATGTTGGGAGTGTGCACAGTGGCTGATGCTGTTCCTGTTCTGAGATGGATGAATTTGGGAGTGAAAGCCATGAAAGAAACTGCCAAAGAATTGGATGTGATCTTAGATGAGTGGTTGGTGGAGCACAGCAAGAAGAGGGAAAAGGGTGTTGAAAGTGACGACCAAGACTTCATGGACATGATGCTTTCAGTGCTCGAAGGTGCCACCATCGATGGCTTCGATGCTCCTACTATAAACAAAGCCACAACTTTGGCACTGATCTTGGGTGCCACTGATACAAGCACAGTTACTCTTACATGGGTGATATGTTTCTTGTTGAAAAATCCTCTTATATTAGAAAAGGTAAAAGAAGAGATCAACACTCACATTGGAGAAGAGAGATTCATAAATGAGTCAGATATGAACAAGTTAGTGTACCTTCAAGCAGTGGTGAAAGAGACACTGAGGTTGTATCCACCAGGTCCTCTTTCAGCACCTCGTGAATTCACACAAGATTGCATGTTAGGTGGCTATCACATAAAAAAGGGAACTCGATTAATCACAAACCTGTGGAAGATCCAAACTGACCCTACTATTTGGTTGGATCCGTTGAAGTTCAAACCTGAAAGGTTTCTCACTACTCACAGAGATGTTGATGTTAAGGGTCAGAATTTTGAGTTGTTACCGTTTGGAAGTGGCAGAAGAATATGTCCAGGAATATCCTTTGGCCTTAACATGATTCATCTAACTCTGGCTAATTTTTTACACTCTTTTGAAATATTTAATAAACCCAATGAAGGTATTGATATGAGTGAAGCCCTTGGAATGACCAACGAGAAAGCTACTCCTCTTGAGATTCTTGTTAAACCACGTTTGTCTTCAGAGTATTATGAATCCATGTGA 1584 0.4489 MDLFLANTLNTTVLALFSLTLLLAFSLFLFRPSKAGRNNLREPPMASRAWPILGHLMLLGGSPTPHKTLAAMADKYGPLFTIKLGSKRALVLSNWKMAKECYTTNDVVVSSRSKLVAIEHVAYNQASFGFAPYGPYWREIRKIVTVFLSDRKTELLSRVRVSEIRSSVKELFHVWSEKKGSDECVVVEMKQWFTELVFNIVFQTMAGKRLFGKSAVVSEKEAEKCVKALREFMHMLGVCTVADAVPVLRWMNLGVKAMKETAKELDVILDEWLVEHSKKREKGVESDDQDFMDMMLSVLEGATIDGFDAPTINKATTLALILGATDTSTVTLTWVICFLLKNPLILEKVKEEINTHIGEERFINESDMNKLVYLQAVVKETLRLYPPGPLSAPREFTQDCMLGGYHIKKGTRLITNLWKIQTDPTIWLDPLKFKPERFLTTHRDVDVKGQNFELLPFGSGRRICPGISFGLNMIHLTLANFLHSFEIFNKPNEGIDMSEALGMTNEKATPLEILVKPRLSSEYYESM 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02554 527 CDD CYP82 77 518 - -
Viun4g02554 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Viun4g02554 527 Gene3D Cytochrome P450 30 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 FunFam Cytochrome P450 82C4 33 516 - -
Viun4g02554 527 Pfam Cytochrome P450 47 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 SUPERFAMILY Cytochrome P450 48 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PANTHER CYTOCHROME P450 82C3-RELATED 22 524 - -
Viun4g02554 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02554 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02554 Viun-Chr4 40425295 40427371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02554 9 524 Cytochrome P450 AT4G31940 46.490 1.03e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02554 - - pvu:PHAVU_004G021100g 874.004