Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02550 ATGGATCTAAATGTCTCTGCAAATGCACTTGTTCCTCTGATAATTCTTTTCTGTTTCTTTTTCTATCGTCTCTTCAAATTTTCTCGAGGAAAAGAAACTCCCACAGTTGCAGGTGCATGGCCAATACTCGGTCACCTTCCATTGCTGAGTGGCTCAAAGACACCCCATAGAACTTTGGGTGATTTGGCTGACAAATATGGACCCATCTTCACCATCCAACTTGGTTCCAAAAAGGCTTTGATAATCAACAACTGGGAAACGGCAAAGGAATGCTTCACAACAAACGACATTGCCGTTTCCTCTCGCCCCAAGCTCGTTGCCATGGAACACATGAGCTACAACCAAGCCATGTTCGCCGTAGCACCATGTGGTCCCTATTGGCGAAAAGTTAGAAAGATTACAACTTTAGAGATCCTCTCCCCTCACCGGGTGAAGCAGCTGCGTCATGTTTTTGAGTCAGAAGTTCGAGGCTCCATCAAGGAGCTCTTTAACTTTTGGTGTAGCAACAAGAACGAGTGTGGCTATGCCTCGGTGGAGCTGAAGCAATGGTTTTCTCATCTGATATTCAACATTGTTCTTCAAATGGTTTTGGGGAAGCGATATTTCAGTGCAGGAACCGTGGATGATGAGAAGGCACGGAGATGTGTGAAGGCCGTGAAGGAGTTCATGCATCTTTTCGGGGTGTTCACAGTGGGAGATGCTGTTCCTTGGTTGAGATGGTTCGATTTTGGAGGCCATGAGAAGGCCATGAAAGAAACTGCGAAGGAATTGGATAGTATTATAGCTGAGTGGTTAGAGGAGCATAGACAAAGCAAGCCTTCGGGTGGAAAGGTTGATGGAGTTCAAGATTTCATGGACGTGATGATTTCAATGCTTGATGGACAAACGAGTGATGGGGTTGATGCAGATACCATGATCAAATCCACTGTACTGACAATAGTTGCAGGAGCCACTGACACAATTAGCACTACTCTTACATGGGCAATGTGTTTGATATTAAGAAATCCTCATGTATTAGAAAAACTTAAACAAGAGCTTCACATAGTTGGTAAAGAGGAATGGCTAAGTGAGAATGACATTTCTAAGTTAACATACCTTCATGCTACAGTTAAAGAAACGTTAAGACTATACCCTCCAGCTCCTCTCTCTGCACCTCATGAATTCACAGAGAATTGTACTGTAGGTGGCTACAATGTCACAAAGGGAACCCGTTTGATTACAAATCTTTGGAAAATTCAGACAGATCAAAATGTTTGGTCATATTCATTAGAGTTTAAACCAGAAAGGTTTCTCACAACTGATAAAAATATTGACATGAAGGGTCATGATTTTGAACTGTTACCATTTGGAGCAGGTAGAAGGATTTGCCCTGGAATATCCTTTGGCCTTCAAGTTGTTCATTTAACTCTTGCTAGTTTTCTGCATTATTTTGAAATCTTAAACCCCTCAACTGAACCTCCTGATATGTCTGAAACCTTTGGATTAACCAACACTAAAACCACTCCACTTGATATTCTGGTTAAACCATGTGTATCTATCTCCTAA 1545 0.4207 MDLNVSANALVPLIILFCFFFYRLFKFSRGKETPTVAGAWPILGHLPLLSGSKTPHRTLGDLADKYGPIFTIQLGSKKALIINNWETAKECFTTNDIAVSSRPKLVAMEHMSYNQAMFAVAPCGPYWRKVRKITTLEILSPHRVKQLRHVFESEVRGSIKELFNFWCSNKNECGYASVELKQWFSHLIFNIVLQMVLGKRYFSAGTVDDEKARRCVKAVKEFMHLFGVFTVGDAVPWLRWFDFGGHEKAMKETAKELDSIIAEWLEEHRQSKPSGGKVDGVQDFMDVMISMLDGQTSDGVDADTMIKSTVLTIVAGATDTISTTLTWAMCLILRNPHVLEKLKQELHIVGKEEWLSENDISKLTYLHATVKETLRLYPPAPLSAPHEFTENCTVGGYNVTKGTRLITNLWKIQTDQNVWSYSLEFKPERFLTTDKNIDMKGHDFELLPFGAGRRICPGISFGLQVVHLTLASFLHYFEILNPSTEPPDMSETFGLTNTKTTPLDILVKPCVSIS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02550 514 CDD CYP82 67 510 - -
Viun4g02550 514 PANTHER CYTOCHROME P450 82C3-RELATED 14 511 - -
Viun4g02550 514 SUPERFAMILY Cytochrome P450 39 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 Gene3D Cytochrome P450 26 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 FunFam Cytochrome P450 82C4 25 508 - -
Viun4g02550 514 Pfam Cytochrome P450 37 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Viun4g02550 514 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02550 514 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02550 Viun-Chr4 40392998 40394869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02550 10 511 Cytochrome P450 AT4G31940 45.988 9.90e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02550 - - gmx:100803451 745.732