Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02548 ATGGATTTTGTTCTAAGTTACATGAATTCCACTACCATTGGACTTCTGTCTCTAACCCTCTTCTGTTTATTTCTGTACAATAACTTCAAATTGTTTCCATGCAAAGAGGCTCCCACAGCCGCAGGAGCATGGCCAGTACTGGGTCACCTTCCGTTGTTGAGTGCTTCAAAGACACCCCATAGAATGTTGGGTGCTTTGGCTGAAAAATATGGACCCATCTTCACCATCAAACTCGGTTCCAAAAAGGCTTTGGTAATCAACAACTGGGAAATAGCAAAGGAATGTTTCACCACAAACGACACGGTGGTTTCCTCTCGCCCCAAGCTTGTCGCCATGGAACTCATGGGCTACAACCAAGCCATCTTTGCCTTTTCACCCTACGGTCCCTATTGGCGCGAGCTACGAAAGATTACAACTTTTGAGATCCTTTCCCCTCGTCGAGTGGAACAAATGCAGCATGTTCGTGTCTCAGAAGTTCAGAACTCGATCAAACAGTTGTATAATGTTTGGTGTAGCCAAAAGAGTGAGTCTGGCTTTGCCTCGGTGGAGCTGAAGCAATGGTTTTCTCACTTGGTATTCAACATGGTTCTTAGAATGGTCGTAGGAAAGAGATATTTTGGCGGTGAAAACGTGGACGATGAGAAGGCACAGCGATGTGTGAAGGCTGTGGAGGAATTCCTGCGTCTGTTGGGTGTGTTCACAGTGGGAGATGCCATTCCTTGGTTGAGATGGTTTGATTTTGGAGGCCATGAGAAAGCAATGAGAGAAACTTCCAAAGATTTGGATATTGTTTTGGGTGAGTGGTTAGAGGAACATAGAGAAAAGAAGGGTTTGGGTGAAGTTCAAGATTTCATGGACGTGATGATTTCCTTGTTTGATGGAAGAACTTTCGATGGGTTTGATGCAGATACCGTGATCAAATCCACTGTGCTGGCAGTGATTGCCGGAGGAAGTGGCACGAATAATATTATTCTTACATGGACAATATATTCAATTTTGAGAAATCCTTTGTTGTTCAAAAAGATAAAAGCTGAACTAGACATTCATGTGGGAAAAGAGAGATGTGTAAGTGAGGATGATATAAGTAAGTTAACATATCTTCAAGCGACAGTCAAAGAAACTCTAAGATTGTATCCTCCAGCTCCTCTTTCGGCACCTCGTGAATTTACGAAAAGTTGTACTTTAAGTGGTTATAACGTAAAAAAGGGAACTCGTTTAATCACAAACCAATGGAAGCTTCACACTGATATCAATGTTTGGGAAGATCCATTAGAGTTCAAACCAGAAAGGTTTCTCACAACTCACCAAAATATTGACTTTCGAGGTCATGATTTTGAGTTATTGCCATTTGGAAGTGGTAGAAGAATGTGTCCTGGAATATCTTTTGGTCTTCAAATGGTGCATTTAACTCTTGCTACTTTTTTGCATTCTTTTGAGATTCAATATTCATCGTCTCATCTTATTGATTTGACTAAAACCTCTCAATGGATAGGCACTAGTATTCCCCTTGAAATTCTTATTAAACCACATCTATCTTTTAGTTGTTATGAAAACAATAAGTTATGTTAA 1569 0.4079 MDFVLSYMNSTTIGLLSLTLFCLFLYNNFKLFPCKEAPTAAGAWPVLGHLPLLSASKTPHRMLGALAEKYGPIFTIKLGSKKALVINNWEIAKECFTTNDTVVSSRPKLVAMELMGYNQAIFAFSPYGPYWRELRKITTFEILSPRRVEQMQHVRVSEVQNSIKQLYNVWCSQKSESGFASVELKQWFSHLVFNMVLRMVVGKRYFGGENVDDEKAQRCVKAVEEFLRLLGVFTVGDAIPWLRWFDFGGHEKAMRETSKDLDIVLGEWLEEHREKKGLGEVQDFMDVMISLFDGRTFDGFDADTVIKSTVLAVIAGGSGTNNIILTWTIYSILRNPLLFKKIKAELDIHVGKERCVSEDDISKLTYLQATVKETLRLYPPAPLSAPREFTKSCTLSGYNVKKGTRLITNQWKLHTDINVWEDPLEFKPERFLTTHQNIDFRGHDFELLPFGSGRRMCPGISFGLQMVHLTLATFLHSFEIQYSSSHLIDLTKTSQWIGTSIPLEILIKPHLSFSCYENNKLC 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02548 522 FunFam Cytochrome P450 82C4 32 508 - -
Viun4g02548 522 CDD CYP82 71 509 - -
Viun4g02548 522 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 SUPERFAMILY Cytochrome P450 43 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 Gene3D Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 Pfam Cytochrome P450 42 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02548 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Viun4g02548 522 PANTHER CYTOCHROME P450 82C3-RELATED 27 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02548 Viun-Chr4 40361893 40364000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02548 37 516 Cytochrome P450 AT4G31970 46.951 2.45e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02548 - - vum:124820532 827.009