Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02547 ATGGATTTTGTTCCAAATTACATGAATTCCACTACCATTGGACTTCTCTCTCTAATCCTCTTCTGTTTATTTCTGTACAATCCCTTCAAATATTTTCAAGGTAAAGAGGCTCCCACAGTTGCAGGAGCATGGCCAATTCTTGGTCACCTTCCACTCTTGAGGGGTCCAAACACACCCCACAGAACTTTGGCTGCTCTGGCTGAACAATATGGACCCATCTTCACCATCAAACTCGGTTCCAAAAAGGCTTTGGTAATCAACAACTGGGAAATAGCAAAGGAATGTTTCACCACAAACGACATGGTGGTTTCCTCTCGGCCCAGGCTTGTCGCAATAGAACTCATGGGCTATAACCATGCCATGTTTGGGTTTGCACCCTACGGTCCCTATTGGCGCGAGCTGCGAAAGATTACAACTTTAGAGATCCTTACCCCACGTCGAGTGGAGCAACTGCAGCATGTTCGTGTCTCAGAACTTCAAAGCTCGATCAAAGAGTTGTATAATCTTTGGTGTAGTAAAAAAGGTGAGTCTGGGTATGCCTCGGTGGAGCTGAAGCAATGGCTTTCTCACTTGACATATAACATGGTTCTTCGAATGGTGGTGGGGAAGAGATTTTTTGGCTGTGAGAACGTGAAAGATGAGAAGGCACAGAGATGTGTGAGGGCTGTGGAGGAGTTTATGCGTCTGGTAGGGGTGTTCGCAGTGGGAGATGCTATTCCTTGGTTGAGATGGTTTGATTTCGGAGGCCATGAGAAGGCAATGAAAGAAACTGCCAAAGATTTGGATAGTGTTTTAGGTGAAGAGTTGGAGGAACATAGACAAAAGAAAAAGAAGGATTTGGGTGAAAAGGTTGATGAATTTCAAGATTTCATGGATGTGATGATTTCCATTCTTGATGGAAGAACTATTGATGGGGTTGGTGCAGATACCATGATCAAATCCACTGTGCTGGGAGTGATTGCAGGAGGGAGTGACACAAGTAGTACTGTTCTTACGTGGGCAATGTATTCGATTTTGAGAAATCCTTTGGTATTGGAAAAAGTACAAGCTGAACTAGACATTCATGTTGGTAAAGAGAGATGTGTATGTGAGTCTGATATAAGTAAGTTAACATACATTCATGCCGTAGTCAAAGAAACATTAAGATTATATCCTCCTGCTCCTCTCTTGCCACTTCGTGAATTTACAGATAATTGTACTATAAGTGGTTATACCATAACAAAAGGAACTCGTCTAATCACAAATCTTTGGAAGATTCAAACAGATAGCAAGGTTTGGGAAGATCCATTAGAGTTCAAACCAGAAAGGTTTCTAACAACTCATAAAGACATTGATATCAAAGGTCATCATTTTGAATTATTACCATTTGGAGGTGGTAGAAGAATATGTCCTGGAATATCCTTTGGACTTCAAATGGTGCATTTTATACTTGCTACTTTTTTGCATTCTTTCGAAATTTTAAGTTCATGGCCTAATCCTACTGATATGACTGAAACATCTGAATCTAGTACCACTAGAGCTATTCCCATTAAAATTCTTATTAAACCACGTCTATCTTTTAGTTACTATGAAAACGACACGTCTTTATATTAA 1593 0.4062 MDFVPNYMNSTTIGLLSLILFCLFLYNPFKYFQGKEAPTVAGAWPILGHLPLLRGPNTPHRTLAALAEQYGPIFTIKLGSKKALVINNWEIAKECFTTNDMVVSSRPRLVAIELMGYNHAMFGFAPYGPYWRELRKITTLEILTPRRVEQLQHVRVSELQSSIKELYNLWCSKKGESGYASVELKQWLSHLTYNMVLRMVVGKRFFGCENVKDEKAQRCVRAVEEFMRLVGVFAVGDAIPWLRWFDFGGHEKAMKETAKDLDSVLGEELEEHRQKKKKDLGEKVDEFQDFMDVMISILDGRTIDGVGADTMIKSTVLGVIAGGSDTSSTVLTWAMYSILRNPLVLEKVQAELDIHVGKERCVCESDISKLTYIHAVVKETLRLYPPAPLLPLREFTDNCTISGYTITKGTRLITNLWKIQTDSKVWEDPLEFKPERFLTTHKDIDIKGHHFELLPFGGGRRICPGISFGLQMVHFILATFLHSFEILSSWPNPTDMTETSESSTTRAIPIKILIKPRLSFSYYENDTSLY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02547 530 Gene3D Cytochrome P450 33 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 Pfam Cytochrome P450 41 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 SUPERFAMILY Cytochrome P450 43 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 CDD CYP82 71 517 - -
Viun4g02547 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Viun4g02547 530 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PANTHER CYTOCHROME P450 82C3-RELATED 20 523 - -
Viun4g02547 530 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02547 530 FunFam Cytochrome P450 82C4 30 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02547 Viun-Chr4 40345742 40349021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02547 8 523 Cytochrome P450 AT4G31970 47.048 5.92e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02547 - - vum:124820532 801.971