Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02538 ATGGTCTATTTAGGGAAGATTCTCACTCACCAACACACAACCTCAACAAAAGCTCTAATGGATTTTGTTCTAAATTACCTGAATTCCACTACCATTGGACTTCTTTCTCTAATCCTCTTCTGCTTATTTCTGTATAATCCCTTCAAATTTTTTCAAGGTAAAGAGGCTCCCACAGTTGCAGGAGCATGGCCATTACTCGGTCACCTTCCACTGTTGAGTGGTTCAAAGACACCCCATAGAATGTTGGGTGCTTTGGCTGAAAAATATGGACCCATCTTCACCATCAAACTCGGTTCCAAAAACACTTTGGTAATCAACAACTGGGAAATAGCAAAGGAATGTTTCACCACAAACGACATGGTGGTTTCCTCTCGCCCCAAGCTTGTCGCCGTTGAACTCATGGGCTACAACCATGCCCTCTTTGGGTTTGCGCCCTACGGTCCCTATTGGCGCGAGCTACGAAAGATTACAACTTTAGAGATCCTTTCCTCTCGTCGAGTGGAACAACTGCAGCATGTTCGTGTCTCAGAAGTTCAGAACTCGATCAAAGAGTTGTATAATGTTTGGTGTAGCCAAAAGGGTGAGTCTGGGTATGCCTTGGTGGAGCTGAAGCAATGGTTTTCTCACTTGGCTTTCAACATGGTCCTTCGAATGGTCGTTGGGAAGAGATATTTTGGCGGTGAAAACTTGGACGATGAGAAGGCACAGCGATGCGTGAAAGCTGTGGAGGAATTCATGCGTCTGTTGGGTGTGTTCACAGTGGGAGATGCCATTCCTTGGTTGAGATGGTTTGATTTTGGAGGCCATGAGAAAGCAATGAAAGAAACTTCGAAAGATTTGGATATTGTTTTGGGTGAGTGGTTAGAGGAACATAGAGAAAAGAAGGGTTTGGGTGAAGTTCAAGATTTCATGGACGTGATGATTTCCTTGTTTGATGGAAGAACTGTTGATGGGTTTGATGCAGATACCATGATCAAATCCACTGTGCTGTCGTTGATTTCAGGAGGAAGTGACACGAGTAATACTGTTCTTACGTGGATAATATCTTTGATTTTGAGAAATCCTTCTGTATTGGAAAAAGCTAAAATTGAACTAGACATTCAAATTGGAAAAGAGAAATTGGTGAGTGAGTCGGATATAAGTAAGTTAACGTATCTCCAAGCTATAGTCAAAGAAACTTTGAGATTGTATCCTCCTGGTCCTCTTTCAGGACCTCGTGAGTTCACAGAAAATTGTACTTTAAGTGGTTATAACATTAAAAAGGGAACTCGTCTAATCACAAATCTTTGGAAGATTCACACAGACCATAATGTTTGGAAAGATCCATTGGAGTTCAAACCAGAAAGGTTTCTAACAACTCACAAAGATGTTGACATTAAAGGTCAACATTTTGAGCTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCAGGAGTATCCTTTGGCCTTCAAATGGTGCATTTTACTCTTGCTACTTTTTTGCATTCTTTTGAAATTCTAAGTTCATCATCTGATCCTATTGATATGACAGAATCCTTTGGATTAACCAACACCAAGGCTACTCCACTTAAGATTCTTATTAAACCACGTCTATCTTTTAGTTGTTATGAAAGCCATTAA 1620 0.408 MVYLGKILTHQHTTSTKALMDFVLNYLNSTTIGLLSLILFCLFLYNPFKFFQGKEAPTVAGAWPLLGHLPLLSGSKTPHRMLGALAEKYGPIFTIKLGSKNTLVINNWEIAKECFTTNDMVVSSRPKLVAVELMGYNHALFGFAPYGPYWRELRKITTLEILSSRRVEQLQHVRVSEVQNSIKELYNVWCSQKGESGYALVELKQWFSHLAFNMVLRMVVGKRYFGGENLDDEKAQRCVKAVEEFMRLLGVFTVGDAIPWLRWFDFGGHEKAMKETSKDLDIVLGEWLEEHREKKGLGEVQDFMDVMISLFDGRTVDGFDADTMIKSTVLSLISGGSDTSNTVLTWIISLILRNPSVLEKAKIELDIQIGKEKLVSESDISKLTYLQAIVKETLRLYPPGPLSGPREFTENCTLSGYNIKKGTRLITNLWKIHTDHNVWKDPLEFKPERFLTTHKDVDIKGQHFELLPFGSGRRMCPGVSFGLQMVHFTLATFLHSFEILSSSSDPIDMTESFGLTNTKATPLKILIKPRLSFSCYESH 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02538 539 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 CDD CYP82 90 530 - -
Viun4g02538 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Viun4g02538 539 FunFam Cytochrome P450 82C4 49 528 - -
Viun4g02538 539 Gene3D Cytochrome P450 52 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 SUPERFAMILY Cytochrome P450 62 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02538 539 PANTHER CYTOCHROME P450 82C3-RELATED 41 536 - -
Viun4g02538 539 Pfam Cytochrome P450 60 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02538 Viun-Chr4 40293819 40296362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02538 56 536 Cytochrome P450 AT4G31970 51.626 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02538 - - gmx:100805047 833.943