Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g02507 | ATGGCTTTGCGATCATGTTCCTCTTCCTTCATCTATGAGGTGTTTCTCAGTTTCAGAGGGGAAGACACACGTCACGGTTTCACTGGCAATCTCTACAAAGCCCTTGATGACAAGGGAATCCACACTTTCATTGATGATGAGGAGCTTCAGAGCGGAGAGGAAATAACACCTGCACTTTTGAATGCAATTGAAGAGTCCAGGATTGGCATCACTGTGCTCTCTAAAGACTATGCTTCATCATCATTTTGCTTAGATGAACTTACAACCATCCTTGAATGCAGGATGAAAGGGCTTTTGGTTATACCAGTCTTTTATATGGTGGACCCTTCAGATGTAAGACAACAGAAAAGTACTTATGGGGAAGCATTGGCTAAGCATCAGAAAAGATTCAAACCTGAAAAGTTGCAGAAATGGAAGATGGCTCTCCGTCAAGTGGCTGATCTCTCAGGCTATCATTTCAAACATGGAAATGAATATGAACACGAGTTTATTGGGAGGATTGTTGAGCGGGTCTCTAGGGAGATTAACAGTGTTCATTTACCTGTTGATGATTATGTAGTTGGACTGGAGTCAAAAGTCCAAGAGGTAAAGAAGCTTTTGGATTTAGGATCTCATGATGGTGTTGTGATAGGGATCCATGGAATGGGTGGGATAGGAAAAACAACACTTGCTCTAGCAGTTCATAATTTGATTGCTGAAAATTTTAAAGAATCATATTTTCTTCAAGATGTTAGAGAAGAATCAGACAAAAATGGGCTAAAGCACCTCCAAAGCATTCTTCTTTCAAAAATGTTTAGAGAGAAGAATATCATCTTAACAAGTTGGCAAGAAGGAGCATCAATGATACAGCAGAGGCTGAGGCGAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAAGCTTGAGCAATTAAATGCATTTGTTGGCAGATCAAATTGGTTTGGTCCCGGCAGCAGAGTCATCATTACCACTCGGGACCAACATCTTCTGACATCTTATGACGTTAAAAGAACTTATGAGGTGAAAAAATTGAAGAATTATGATGCTCTTCAGTTACTAACATGGAAAACTTTTAAAACGGGAATGGCTGATCCAAGTTATGAAGAGGTCTTGCATCGTGCAGTAACTTATGCTTCAGGCCTTCCATTGGCCTTGGAAGTAATAGGTTCCAACTTGGTTGGAAAAAGTGTAGAAGAATGGGAGTCTGCTATTGAGCATTACAAAAGAATTCCTAGTGATGAAATCCTAAAGATACTTAAAGTAAGCTTTGATACTTTGGGTAGAGAAGAGAAGAATGTTTTTCTTGACATAGCTTGTTGCTTGAAAGGATGTAAATTGGCAGAGATTGAGCATATGTTTCGTGCTCTTTATGATGACAGCATGAAATATCATATTGGTGTGTTGGTTGAAAAATCTCTCATAAAGATTAGTCAGCGTAGAACGGTTGAAATGCACGACTTGATTCAGGACATGAGTAGAAGAATTGAGCAGCAAGAATCACCTAAAGAGCCAGGAAAATGCAAGAGACTATGGTTACCAAAAGATATAATTCAAGTTTTAAAATACAACACGGGAACTTGGAAAATTGAGATCATATGTCTAGATATCTCCATATCTGAGAGAGAAGAAACGATATACTGGAATGGAAATGCCTTCAGAAAGATGAAAAACCTTAAAATACTTATCATAAGAAATGGTAAATTTTCCGAAGGTCCCAATTATTTTCCAGAGAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCAAATTGTTTACCATCAAATTTTGATACGACCAAACTTGTGATATGCAAGTTACCTCACAATCCTTTTACGTCATTTAGGTTCCATGGTTCATCAAAGAACTTCAATCTAACCGTCTTGAATTTTGACAAGTGCAATTATTTAACACAGATACCAAACTTGTCTGATCTATTAAATTTGGAAGTACTTTCATTTGAAAAGTGTACGAGTTTACTAGCAGTTCACGACTCAATTGGTTTTCTAAATAAACTCAAAATATTGAAAGCTGAAGGTTGCACCAAGCTCAGTAGATTTCCACCTCTCAACTTGACCTCTCTTGAAGAACTTGAACTTTCATACTGTTCAAGTCTGGAAAATTTTCCAGAAATATTAGGAAAGATGGGAAACATAAGGGAACTTAGTTTGTTTGAACTTCCCATAAAAGAATTGCCAGTTTCATTTCATAATCTTATTGGACTCCAAGAGTTAGCGATACAGTGTGATTTTGTTCAGTTAGGCAGCATTGCCTTGACGCCCGAACTGCCTGATTTTAGAGTATATAAAGGTAAAGGATGGCAATGGGTAAAATCAGAAGAGGGTGAAGAAAAAGTGGGTTCAATGGTATCTCCAAAGATGCATAAGTTTTGGGTTTTATCTTGCAACTTGAATGATGATTTTTTTTCAGCATGTTTCAAGCAGTTAGCTCAAGTGAGTGATTTACGGCTAAGGGAAAGTAATGTCACATTCCTTCCGGAATGCATCAAAGAATTTCACAGCCTATCTTCTCTCGATGTGAATGATTGCAAGCATCTTCAGGAAATTAGAGGGGTTCCACCAAATTTGAAATATTTCAGGGCAATAAACTGTATATCCTTGACTTCCACGGGTTCAAGCATGCTGTTAAATCAGCATCTTCACGAGGCTGGAGGAACTGACTTTATCTTCCCAGGAGGAACTATTCCAGAGTGGTTCCATAAACAAAGGAAGGGAACTTCAATTTCTTTCTGGTTTCGTAAGAAATTCCCTGCCAAAGTTCTTTGTCTTCTTATTGCACCTGTACTGGGTGATAACATAATAGGATTGGTTAGACACATGATGTTGATCAATGGAAAAGTTAAAAAACAATATTTGCTACATTATCTGAATAGAGAAGTGAAGAAGATGGAGTTGGATTATACACATCTCTTTGATCTACGACAATCACATTTCTCCCCTGATGATGATCTGATGGAGGAAGTGTCTTTAGAAAAGGAATGGAATCATGTGGAGATCACATATGAAGGCTTGATACAGAGCTCCCTTATTAAGATAATCGGAATCCATGTTGTGAAAGAGGAAAACAGCAGCATGGAGGACATTCGATATGATGATCCTTACGCAATCACAAAACCATTTATCATAAAATACACAGCTTTAATGTTGACATTCATATTTTTTACTGGTTCTTTTCTGTTGTTCTCTTACTTTTAA | 3213 | 0.3775 | MALRSCSSSFIYEVFLSFRGEDTRHGFTGNLYKALDDKGIHTFIDDEELQSGEEITPALLNAIEESRIGITVLSKDYASSSFCLDELTTILECRMKGLLVIPVFYMVDPSDVRQQKSTYGEALAKHQKRFKPEKLQKWKMALRQVADLSGYHFKHGNEYEHEFIGRIVERVSREINSVHLPVDDYVVGLESKVQEVKKLLDLGSHDGVVIGIHGMGGIGKTTLALAVHNLIAENFKESYFLQDVREESDKNGLKHLQSILLSKMFREKNIILTSWQEGASMIQQRLRRKKVLLILDDVDKLEQLNAFVGRSNWFGPGSRVIITTRDQHLLTSYDVKRTYEVKKLKNYDALQLLTWKTFKTGMADPSYEEVLHRAVTYASGLPLALEVIGSNLVGKSVEEWESAIEHYKRIPSDEILKILKVSFDTLGREEKNVFLDIACCLKGCKLAEIEHMFRALYDDSMKYHIGVLVEKSLIKISQRRTVEMHDLIQDMSRRIEQQESPKEPGKCKRLWLPKDIIQVLKYNTGTWKIEIICLDISISEREETIYWNGNAFRKMKNLKILIIRNGKFSEGPNYFPESLRVLEWHGYPSNCLPSNFDTTKLVICKLPHNPFTSFRFHGSSKNFNLTVLNFDKCNYLTQIPNLSDLLNLEVLSFEKCTSLLAVHDSIGFLNKLKILKAEGCTKLSRFPPLNLTSLEELELSYCSSLENFPEILGKMGNIRELSLFELPIKELPVSFHNLIGLQELAIQCDFVQLGSIALTPELPDFRVYKGKGWQWVKSEEGEEKVGSMVSPKMHKFWVLSCNLNDDFFSACFKQLAQVSDLRLRESNVTFLPECIKEFHSLSSLDVNDCKHLQEIRGVPPNLKYFRAINCISLTSTGSSMLLNQHLHEAGGTDFIFPGGTIPEWFHKQRKGTSISFWFRKKFPAKVLCLLIAPVLGDNIIGLVRHMMLINGKVKKQYLLHYLNREVKKMELDYTHLFDLRQSHFSPDDDLMEEVSLEKEWNHVEITYEGLIQSSLIKIIGIHVVKEENSSMEDIRYDDPYAITKPFIIKYTALMLTFIFFTGSFLLFSYF | 1070 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g02507 | 1070 | ProSiteProfiles | TIR domain profile. | 10 | 175 | IPR000157 | GO:0007165 | |
Viun4g02507 | 1070 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 437 | IPR027417 | - | |
Viun4g02507 | 1070 | SMART | till_3 | 11 | 148 | IPR000157 | GO:0007165 | |
Viun4g02507 | 1070 | SMART | AAA_5 | 206 | 344 | IPR003593 | GO:0016887 | |
Viun4g02507 | 1070 | Gene3D | Ribonuclease Inhibitor | 512 | 766 | IPR032675 | - | |
Viun4g02507 | 1070 | Gene3D | Ribonuclease Inhibitor | 783 | 905 | IPR032675 | - | |
Viun4g02507 | 1070 | Gene3D | - | 5 | 178 | IPR035897 | - | |
Viun4g02507 | 1070 | PRINTS | Disease resistance protein signature | 689 | 705 | - | - | |
Viun4g02507 | 1070 | PRINTS | Disease resistance protein signature | 209 | 224 | - | - | |
Viun4g02507 | 1070 | PRINTS | Disease resistance protein signature | 285 | 299 | - | - | |
Viun4g02507 | 1070 | PRINTS | Disease resistance protein signature | 378 | 392 | - | - | |
Viun4g02507 | 1070 | Pfam | NB-ARC domain | 190 | 409 | IPR002182 | GO:0043531 | |
Viun4g02507 | 1070 | ProSiteProfiles | Leucine-rich repeat profile. | 624 | 646 | IPR001611 | GO:0005515 | |
Viun4g02507 | 1070 | SUPERFAMILY | L domain-like | 543 | 879 | - | - | |
Viun4g02507 | 1070 | SUPERFAMILY | "Winged helix" DNA-binding domain | 413 | 521 | IPR036390 | - | |
Viun4g02507 | 1070 | Gene3D | - | 343 | 427 | IPR042197 | - | |
Viun4g02507 | 1070 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 858 | IPR044974 | GO:0006952 | |
Viun4g02507 | 1070 | Gene3D | - | 179 | 341 | IPR027417 | - | |
Viun4g02507 | 1070 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 8 | 177 | - | - | |
Viun4g02507 | 1070 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 151 | IPR035897 | - | |
Viun4g02507 | 1070 | Pfam | TIR domain | 12 | 175 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g02507 | Viun-Chr4 | 40020810 | 40024753 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g02507 | 7 | 747 | WRKY Transcription Factor Family | AT4G12020 | 30.537 | 1.52e-77 | 278 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g02507 | - | - | gmx:106794133 | 1337.78 |