Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02491 ATGGCGCCCTCAACCCCTCAAGTCATCACCTGCAAAGCTGCAGTGGCATGGGGAGCTGGGGAGCCACTGGTGATGGAGGAAGTGGAAGTGAGCCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGCCGCAGTGATCTCTCTGCTTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCATGAAGGATCAGGGATTGTTGAGAGTGTGGGACTGGGAGTGACTGAATTCAAAGAGGGTGACCATGTGCTAACAGTATTCATTGGAGAATGCATGACATGCAGACAGTGTACATCTGGAAAAAGTAACATTTGTCAAGTTTTAGGATTGGAAAGAAGGGGTTTAATGCACAGTGATCAGAAGACACGCTTCTCAGTAAAAGGGAAGCCTGTTTATCATTATTGCGCTGTTTCAAGTTTCAGTGAATATACAGTAATCCATTCCGGATGTGCAGTGAAAGTCAGCCCCCATGCACCTCTTGAGAAAATTTGCCTTCTGAGCTGTGGGGTTGCTGCAGGTCTGGGTGCAGTATGGAATGTTGCTGATGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCTATCCGTTGCTCAAGCCGCAAAACTAAGAGGTGCATCTAGAATAATTGGTGTTGACAACAACCCACAGAAGTGTGAAAATGCTAAGGCTTTTGGGGTTACAGAAGTTCTTGACCCGAATTCCTGTGAAGAACCTATTGCTCAGGTTATTAAGCGGATTACTGATGGTGGAGCAGATTTCTCTTTTGAATGTGTCGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTAACACTTGGGGTGCCAAAGGCAAAACCTGCGATGTCAGCTCATTATGGACTACTACTGATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGTTGGAAACCAAAATCTGATCTTCCTTCGTTAGTAGAGAAGTATGTCAACAAGGAAATCCAGATTGATGACTACATAACACACAATTTGCCATTTCATGACATCAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTGCGTTGTGTTATCCACATGCCAAGATAA 1131 0.4483 MAPSTPQVITCKAAVAWGAGEPLVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEGSGIVESVGLGVTEFKEGDHVLTVFIGECMTCRQCTSGKSNICQVLGLERRGLMHSDQKTRFSVKGKPVYHYCAVSSFSEYTVIHSGCAVKVSPHAPLEKICLLSCGVAAGLGAVWNVADVSKGSTVVIFGLGTVGLSVAQAAKLRGASRIIGVDNNPQKCENAKAFGVTEVLDPNSCEEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKAKPAMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYVNKEIQIDDYITHNLPFHDINKAFNLMKEGKCLRCVIHMPR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02491 376 FunFam Alcohol dehydrogenase 6 14 195 - -
Viun4g02491 376 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 317 - -
Viun4g02491 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Viun4g02491 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 338 IPR036291 -
Viun4g02491 376 SUPERFAMILY GroES-like 5 184 IPR011032 -
Viun4g02491 376 Pfam Zinc-binding dehydrogenase 203 326 IPR013149 -
Viun4g02491 376 Pfam Alcohol dehydrogenase GroES-like domain 36 156 IPR013154 -
Viun4g02491 376 SUPERFAMILY GroES-like 325 373 IPR011032 -
Viun4g02491 376 Gene3D - 14 369 - -
Viun4g02491 376 Gene3D - 179 317 - -
Viun4g02491 376 CDD alcohol_DH_plants 9 373 - -
Viun4g02491 376 PANTHER ALCOHOL DEHYDROGENASE 7 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02491 Viun-Chr4 39910371 39920908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02491 37 111 Monolignol Biosynthesis Gene Families AT2G21730 39.241 1.19e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02491 K00001 - gmx:100819938 718.383