Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g02489 | ATGACTATACCAGTTCAATCATGTATACACTTTTCATGTCACATTTTTCTGGTTCTGTTCTTCTTCCTTGTTCACACAAGCTCACAATCTTTGAATGATCAAGAGCATGCAGTTTTGCTTAACATAAAGCAATATCTTGAAGACCCTTCTTTCCTCTCCCATTGGAGTTCAACTTCTTCTCACTGTTCATGGCCAGAGATCACATGCACCGCTGCCTCAGTCACTTCCCTCACCCTCTCACATTCCAACATCAACAAAACTATACCACCCTTCATCTGTGACCTCACCAACCTCACACACCTTGATTTCAGCTTCAACTTCATCCCTGGTGATTTCCCCACGCCCCTCTACAACTGCTCCAAGTTGGAGTACCTAGATCTTTCAGGGAACAACTTTGATGGCAAGGTTCCTCATGACATTGACCGTTTGGGTGCTAATTTGCAATATCTCAACCTTGGTTCTACCAATTTCTATGGTGATGTTCCTGCTAGTATTGCAAATTTAAAGCAATTGAGACAGCTTAAACTTCAGTTTTGCTTATTGAATGGAACTGTTGCTGCTGAGATTGATAGCTTGCCCAATCTTGAGTTCTTGGACTTGTCCTCTAACTTCTTGTTTCCTAAATGGAAGTTGCCTTGGAACTTGACCAAGTTCAACAAATTGAAGGTGTTTTATTTGTTTGGCACCAACTTGGTAGGGGAAATCCCAGATAACGTTGGAGATATGGTGGCTTTGGAGAAGCTGGATGCATCAAAAAATGGCTTAACTGGAGGAATTCCAAGTGGTTTATTCTTGCTGAAGAATCTGACCTCACTCTATCTTTTTGAAAACAGCCTCTCAGGGGAGATACCAAGTGTGGTTGAGGCATTAAACTTGGTCAACCTTGATCTTGCAAGAAACGATCTCACAGGGAAAATACCAGATGATTTTGGAAAACTGCAACAGCTCTCATGGTTGAGTCTGTCTTTGAATAGCTTGTCAGGTGTGATACCACAAAGCTTAGGCACTCTTCCAGCTCTCAGTGATTTTCGCGTGTTTTTCAACAACTTATCAGGTACTCTTCCTCCTGATTTTGGCCGTTACTCAAAGCTTAAAACCTTTTTGATTGCATCTAATAATTTTACTGGGAAGTTACCGGATAACCTGTGCTATCATGGGACGTTACTTAACTTGTCTGTTTATGAGAATAAGCTGAGTGGTGAGTTGCCAGAATTTCTTGGAAATTGCAGTAGTTTACTGGACCTGAAAATTCACGAAAATGAGTTTTCTGGTAACATTCCTAATGGTCTTTGGACATCTTTCAATTTGTCAAATTTCATGGTGAGCCATAACAAGTTCACTGGTGTGCTTCCTGAAAGGCTATCTTGGAATGTTTCGAGGTTTGAGATAGGTTACAATCAATTTTCTGGTGGAATTCCTAGTGGGGTATCATCATGGACTAATTTGGTAGTGTTTGATGCCAGTAAGAACAATTTCAATGGAAGTATTCCAGAAGGGCTAACAGCTCTTCCTAAGTTAACAACCTTGTTGCTTGATCAGAACCAACTCACTGGGGCACTTCCATCAGATATAATATCATGGAAATCCTTGGTCACTCTAAATTTGAGCCAAAACCAACTCTCTGGACAAATCCCTCATGCAATTGGTCAGTTACCAGTCCTTAGTCAGCTTGATCTATCAGAAAATGGATTCTCTGGCCAACTTCCTTCCCTCTCTACCAGACTCACCAATCTCAATTTGTCTTATAATCATTTAACTGGGAGGATTCAAAGGGAGTTTGAAAATTCTGCGTATGCTGGTAGCTTTTTGGGCAATTCTGGTCTTTGTTCTGACAACCCAGCACTGAACCTTACCTTGTGCAATTCTGGCCTTCAAAGAACAAGCAAGGGCTCATCTTGGTCTATTGGTTTGATTATATGCTTGGCGGTAGTAGCCTTGTTACTGGCCCTTTTGGCATCAGTCATGTTTATTAGATTTCAAAGAAAGAGAAAGAAAGGATTAGACAACTCTTGGAAGCTCATTTCCTTTCAGAGGGTGAATTTCACAGAATCAACCATTGTCTCATCAATGACAGAACAAAACATCATTGGTAGCGGTGGATATGGTACGGTATACCGCATTGATGTTGGTTCAGACTATGTTGCTGTGAAAAAGATTTGGAATAACAGAAAGTTAGAGAAGAAGCTTGAGAGCTCCTTCCGTGCAGAAGTTAGAATATTGAGCAACATTCGTCATACCAACATTGTGAGGTTGATGTGTTGTATCTCTAATGAAGATTCTATGCTCCTTGTGTATGAGTATCTGGAAAATCTCAGCCTAGATAAGTGGCTGCATCAGAGTGTTAAGCCAGGTTCAGTCAATAAAGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCAATTGGGGTTGCTCAGGGTTTGAGCTACATGCATCATGACTGTTTACCACCTATTGTTCATAGAGATATAAAAACAAGCAACATCCTTCTGGATTCTCAGTTCAATGCAAAAGTTGCTGATTTTGGACTAGCTAAGTTGTTAATCAAACCAGGAGAACTTAGCACCATGTCAGCTGTTATTGGCTCATTTGGCTATATTGCTCCAGAATTTGTGCAATCAACCAGAGTTAGTGAAAAGATTGATGTGTTCAGCTTTGGAGTAGTGCTATTAGAACTGACAACCGGTAAAGAAGCAAGTTATGGAGACCAACATTCATCTCTTTCAGAGTGGGCATGGCGTCACATTCTGATTGGAGACAATGTTGAAGAATTGCTAGACAAAAATGTCACTGAAGCCAGTAACATAGATGAAATGTGCACTGTTTTCAAACTTGGTGTCATGTGCACTGCAACATTGCCTACAAGTAGGCCTTCCATGAAGGATGCCCTACAAATATTGCAAAGCTTAGCAGAACCATTATTTTATGCAGAGAAGAACTTTGGGCACTACTATGATGCTATGCCTCTTCTCAAGAGTTCAAAGGAAACCAAATTGAATGTTGATCATGATAGTGAATGA | 3018 | 0.4062 | MTIPVQSCIHFSCHIFLVLFFFLVHTSSQSLNDQEHAVLLNIKQYLEDPSFLSHWSSTSSHCSWPEITCTAASVTSLTLSHSNINKTIPPFICDLTNLTHLDFSFNFIPGDFPTPLYNCSKLEYLDLSGNNFDGKVPHDIDRLGANLQYLNLGSTNFYGDVPASIANLKQLRQLKLQFCLLNGTVAAEIDSLPNLEFLDLSSNFLFPKWKLPWNLTKFNKLKVFYLFGTNLVGEIPDNVGDMVALEKLDASKNGLTGGIPSGLFLLKNLTSLYLFENSLSGEIPSVVEALNLVNLDLARNDLTGKIPDDFGKLQQLSWLSLSLNSLSGVIPQSLGTLPALSDFRVFFNNLSGTLPPDFGRYSKLKTFLIASNNFTGKLPDNLCYHGTLLNLSVYENKLSGELPEFLGNCSSLLDLKIHENEFSGNIPNGLWTSFNLSNFMVSHNKFTGVLPERLSWNVSRFEIGYNQFSGGIPSGVSSWTNLVVFDASKNNFNGSIPEGLTALPKLTTLLLDQNQLTGALPSDIISWKSLVTLNLSQNQLSGQIPHAIGQLPVLSQLDLSENGFSGQLPSLSTRLTNLNLSYNHLTGRIQREFENSAYAGSFLGNSGLCSDNPALNLTLCNSGLQRTSKGSSWSIGLIICLAVVALLLALLASVMFIRFQRKRKKGLDNSWKLISFQRVNFTESTIVSSMTEQNIIGSGGYGTVYRIDVGSDYVAVKKIWNNRKLEKKLESSFRAEVRILSNIRHTNIVRLMCCISNEDSMLLVYEYLENLSLDKWLHQSVKPGSVNKVVLDWPKRLKIAIGVAQGLSYMHHDCLPPIVHRDIKTSNILLDSQFNAKVADFGLAKLLIKPGELSTMSAVIGSFGYIAPEFVQSTRVSEKIDVFSFGVVLLELTTGKEASYGDQHSSLSEWAWRHILIGDNVEELLDKNVTEASNIDEMCTVFKLGVMCTATLPTSRPSMKDALQILQSLAEPLFYAEKNFGHYYDAMPLLKSSKETKLNVDHDSE | 1005 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g02489 | 1005 | Gene3D | Transferase(Phosphotransferase) domain 1 | 768 | 979 | - | - | |
Viun4g02489 | 1005 | FunFam | Receptor-like protein kinase HSL1 | 670 | 767 | - | - | |
Viun4g02489 | 1005 | FunFam | Receptor-like protein kinase HSL1 isoform A | 296 | 620 | - | - | |
Viun4g02489 | 1005 | SUPERFAMILY | RNI-like | 290 | 588 | - | - | |
Viun4g02489 | 1005 | Gene3D | Ribonuclease Inhibitor | 385 | 626 | IPR032675 | - | |
Viun4g02489 | 1005 | Pfam | Leucine rich repeat N-terminal domain | 33 | 69 | IPR013210 | - | |
Viun4g02489 | 1005 | FunFam | Putative leucine-rich repeat receptor-like protein kinase family protein | 188 | 288 | - | - | |
Viun4g02489 | 1005 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 818 | 830 | IPR008271 | GO:0004672|GO:0006468 | |
Viun4g02489 | 1005 | Gene3D | Phosphorylase Kinase; domain 1 | 669 | 767 | - | - | |
Viun4g02489 | 1005 | Pfam | Leucine rich repeat | 73 | 132 | IPR001611 | GO:0005515 | |
Viun4g02489 | 1005 | Pfam | Leucine rich repeat | 291 | 350 | IPR001611 | GO:0005515 | |
Viun4g02489 | 1005 | Pfam | Protein kinase domain | 692 | 964 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g02489 | 1005 | CDD | STKc_IRAK | 696 | 969 | - | - | |
Viun4g02489 | 1005 | ProSitePatterns | Protein kinases ATP-binding region signature. | 696 | 718 | IPR017441 | GO:0005524 | |
Viun4g02489 | 1005 | Gene3D | Ribonuclease Inhibitor | 210 | 384 | IPR032675 | - | |
Viun4g02489 | 1005 | SUPERFAMILY | Protein kinase-like (PK-like) | 681 | 966 | IPR011009 | - | |
Viun4g02489 | 1005 | Gene3D | Ribonuclease Inhibitor | 146 | 209 | IPR032675 | - | |
Viun4g02489 | 1005 | ProSiteProfiles | Protein kinase domain profile. | 690 | 974 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g02489 | 1005 | SMART | serkin_6 | 690 | 974 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g02489 | 1005 | Gene3D | Ribonuclease Inhibitor | 33 | 145 | IPR032675 | - | |
Viun4g02489 | 1005 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 390 | 969 | - | - | |
Viun4g02489 | 1005 | FunFam | Kinase family with leucine-rich repeat domain-containing protein | 768 | 980 | - | - | |
Viun4g02489 | 1005 | FunFam | Receptor-like protein kinase HSL1 isoform A | 32 | 183 | - | - | |
Viun4g02489 | 1005 | SUPERFAMILY | RNI-like | 63 | 351 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g02489 | Viun-Chr4 | 39900436 | 39904252 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g02489 | 31 | 992 | Receptor kinase-like Gene Family | AT5G25930 | 51.287 | 0.0 | 934 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Viun4g02489 | Pkinase | 2.9e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g02489 | - | - | gmx:100813894 | 1661.74 |