Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02456 ATGGCATTAAAACAAGCACCTATTTCTTCTTCTTCTTCTTTTACGTCAAAATACAGTTATGATGTTTTTCTTAGTTTTCGTGGTACAGATACCCGTTTTGGTTTCACTGGTAATCTATACAGTGCTTTGAGTCAAAGGGGAATCTTTACCTTCATCGATGATGAAGCTCTCAGAATGGGAGAAGAAATCACACCTTCTCTTCGCAAGGCAATCCAAGAATCCAGGATATCCATCATTGTTTTCTCCAAAAACTATGCTTCCTCAACATTTTGTTTGGATGAACTCCTCCAAATCATTGAATGCCACACAAAACAGAACATGTTGATTTTGCCAGTGTTCTATGACGTAGAGCCATCACAAGTGCGACATCAAAGAGGGAGTTACCAAGAAGCATTTGCAAAGCATGAAGGTGAAAAATTCAAAGATGACATTGAGAAGGTTCAACAATGGAGGCTGGCTTTGCGTCATGCTGCGAATTTGTCTGGTTTGCATTTCAAAACTGGTGAAGAGTACGAGTCTGAGATAGTGAAAAGGATCGCAGAAGAGATCTCCACTAAGCTTAATCGACCTCCCTTGCACATTGCTGATTATCCTGTTGGTTTGAAAGTTCAGATGCAACAGATACAACAAATCATGGGTGATGAGTTTGATAACAAAGTGACCATGCTTGGGATTCATGGAATGGGAGGAATAGGAAAATCAACTCTTTCACGTGCGATGTACAACTTGATGGCAAATCAATTTGAAGCTTCGCACTTTCTTGCTAATGTCAGGGAAAAGTCAGAGAAGGACGGTCTAGTGCATATCCAGGAGACAATGTTGTCTGAGTTGGTGGGGGAAAAAATCAAGTTAGGAGATGTGCATCGAGGAATTCCAATACTACAGCATAGACTCTGTGGGAAAAAGGTCCTCCTTGTGCTTGATGATATTAGTAAAAGAGAACAATTGCATGCAACTGCTGGAGGACTTGATTGGTTTGGCCCTGGTAGCATCATCATCATAACAACAAGGGATAAGCATTTGTTAGATGTTCATGGAGTTCAAAAACAATACATGGTTGGTGAAATTAACGAAATGGAAGCCCTTGAATTGTTTAAGTGGAATGCTTTCAAGAACAAGGAAGTTGATCCATGTTACAAGGAAGTCACAAAACGTGCAATGTATTATGCCAACGGCCTTCCACTGGCTTTGGAAACGATAGGCTCAAACTTGTTTGGCAAAACCTTGGATGAATGGGAATCTGCATTAGAAAATTATGAGAGAATTCCAAATAGAGATGTTCAGGAAGTTCTTAGAGTTAGCTATGATAGTTTGGATGCTTATGAGAAAGAAATATTTCTTGACATAGCTTGCTTCTTCAGAGGATGCTCTGTTAAATACGTTACATATACGCTTGAGGCAAGAGGTTTTCCTACAAAATTTGGTCTGAGAGTGCTGGAAGAAAAGTCTCTCATTAAAATTCGGGAATGTCGTCATGAAACTGTGACAATGCATGACCTGATTCGGTGTATGGGAAAAGAAATAGTTAGACAACAGTCAGCTCTGCCTCACAAACGGAATAGGTTGTGGTTTTATGAGGACATTGTTTGCGTATTGGAGAAAAACAAGGAAAATGATAAAATTGAAGCGATGATGTTGGACATGCCAGAACACCAAGAAATCCAATGCAAACCAAAGTTGTTTGGAAAAATGAAAAGCTTACGGATGCTTATTATAAAAGAGAAAGTTTGCTTTCTTAGAACCCCTCCTGCTCTGCCGAACAGTTTGAGGGTGCTGGAATGGCAGGGATATCCTACAACTTCTTTACCGCGTAATTTTCATTTGAAGAATCTTGTCATACTCAACTTGTCATATAGTTACTTTGGATGGGAAAAACCACTAGAGAATTCAAAAGTTTTGAGACAATTGATTCTCAAAGGCTGTAAGAATATTAGACGAATACCTGACATGTCTGGTTTCCCCAATTTGACAGAACTCCGTGTTGGTGAATGCACAAATCTGTTTGAGATTCATGATTCAGTTGGATCTTTACTTAATCTTAAAAAGTTTTGTGCTGAAGGATGTAGCAAGCTCACGATTGGTCCAAGTCGCATAAAGTTGATATCTTTGGAGCATCTCTGCCTTCGGGACTGCAGCAGTCTTGTTATGTTTCCAGAAGTATTGGCACCAATGCACAAACTAAAATACGTTGACTTGGTAGGAACTGGCATAAGAAATCTGCCACTTCCAATGCAAAGTCTTGACGGTATTCAAGCATTGTCCCTTGGGAAAGGCAAAATGCTTGAAATTAATGAATCCTCCAATTTCTTTCAAACCCTGCCAATATTCTTTCCTAATTTGACAACATTATATTTACGAGACTTAGACATTACAATCCTTCCTGCCAGCATCGAAGAATATCACTCCTTGAAATATCTGCACGTGACCAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATTGAGCATAAATGAGTTCTCAGCAGCAAACTCTCCAGTTAAAGCCAACTCTTTGACATCAAAACTCAGACAGGCCATTCATTCTGCTGCAATTAGAATCTTTGTTCTCCCAGGTCGGAAAATCCCAGAATTATTTGACCACTCTAGCAGGGGAAACTCTCTACTTTTTTGGTTTCGTAAAGAATTGCCCTCTCTCGCTGTGTGTGCTATTATTGGAGTCTGGGAAAATGTCAACCCTCCTTTCGTTGCCAGGTTTAATTTCCATGTTAGAGTGAATAATATTTATAAGTGTGTTTCTTGTTTCAGTTGTGGTAATATAAACTGGACAACTGAGGATAGTCACATAATTATACTCAATCGTCAAAAAGATTTTCAACATCCATTGAGTTCGGATATTCAGAGAGCGCTTCTGACGAATGAGTGGATTCCTGGGAAAATATTGTTGAGCATAGAACCAGATAATGATTCAAATAAGTTGGGAGAAATCAAAAGGACAGGGGTTTATGTAAATCGAACATGTAGTAGAATGGAGGATGTTCGGTTCAGAGATCCTTATGATCTCCATAAAGCAAGTACTACGGAAAATAAACTTGTGTTGCTTAGTGAGGCATCTGATACACAACAACAAGAACAGTCCTCACCTTTATTAAACTCCACAACCCCATTGGAATCTGCTGTTGGGGAACAACCTTTGAATTATGTGTACAACAATTCAGATTCAAAAGAATCGACATCCCCTGTTGACTCCAATAACCAAGATGGAGTGCTTCTAGATGATCAACCAATATTAGCTCCAAGTTTTGCAGAGATGCAAAATGACGAGGCCAAAAGAGAAAGGGCACCACTGATATTAGAAGTTTCAAGTGAGTTCACTGCTCAGAGCAGGGATTACAGTAAAGTAAGTATGAAAATTGAGTCCACAGCATCCCAGTCACGTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTCAGAAGCAGTTCAGAAATTCCATGGTCTTGGAAAATCAGATACACCAAAGGCTGACCATGATTAAGAAAATGGAAGAAGAATTAGGAGATAAACTCGGTGCTATTAAAGCCGACATCTCTGCCATTGAAGCTAACAACTCTTCCATTAAAGCTAACATCTCTGACATTAAATCTATATTTCTCCAGACTGATCTGAGGTACAACAATTGA 3642 0.3932 MALKQAPISSSSSFTSKYSYDVFLSFRGTDTRFGFTGNLYSALSQRGIFTFIDDEALRMGEEITPSLRKAIQESRISIIVFSKNYASSTFCLDELLQIIECHTKQNMLILPVFYDVEPSQVRHQRGSYQEAFAKHEGEKFKDDIEKVQQWRLALRHAANLSGLHFKTGEEYESEIVKRIAEEISTKLNRPPLHIADYPVGLKVQMQQIQQIMGDEFDNKVTMLGIHGMGGIGKSTLSRAMYNLMANQFEASHFLANVREKSEKDGLVHIQETMLSELVGEKIKLGDVHRGIPILQHRLCGKKVLLVLDDISKREQLHATAGGLDWFGPGSIIIITTRDKHLLDVHGVQKQYMVGEINEMEALELFKWNAFKNKEVDPCYKEVTKRAMYYANGLPLALETIGSNLFGKTLDEWESALENYERIPNRDVQEVLRVSYDSLDAYEKEIFLDIACFFRGCSVKYVTYTLEARGFPTKFGLRVLEEKSLIKIRECRHETVTMHDLIRCMGKEIVRQQSALPHKRNRLWFYEDIVCVLEKNKENDKIEAMMLDMPEHQEIQCKPKLFGKMKSLRMLIIKEKVCFLRTPPALPNSLRVLEWQGYPTTSLPRNFHLKNLVILNLSYSYFGWEKPLENSKVLRQLILKGCKNIRRIPDMSGFPNLTELRVGECTNLFEIHDSVGSLLNLKKFCAEGCSKLTIGPSRIKLISLEHLCLRDCSSLVMFPEVLAPMHKLKYVDLVGTGIRNLPLPMQSLDGIQALSLGKGKMLEINESSNFFQTLPIFFPNLTTLYLRDLDITILPASIEEYHSLKYLHVTNCKKLQEIRGLPLSINEFSAANSPVKANSLTSKLRQAIHSAAIRIFVLPGRKIPELFDHSSRGNSLLFWFRKELPSLAVCAIIGVWENVNPPFVARFNFHVRVNNIYKCVSCFSCGNINWTTEDSHIIILNRQKDFQHPLSSDIQRALLTNEWIPGKILLSIEPDNDSNKLGEIKRTGVYVNRTCSRMEDVRFRDPYDLHKASTTENKLVLLSEASDTQQQEQSSPLLNSTTPLESAVGEQPLNYVYNNSDSKESTSPVDSNNQDGVLLDDQPILAPSFAEMQNDEAKRERAPLILEVSSEFTAQSRDYSKVSMKIESTASQSRKVDEVEAGLETQKQFRNSMVLENQIHQRLTMIKKMEEELGDKLGAIKADISAIEANNSSIKANISDIKSIFLQTDLRYNN 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02456 1213 SUPERFAMILY L domain-like 544 829 - -
Viun4g02456 1213 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 820 IPR044974 GO:0006952
Viun4g02456 1213 MobiDBLite consensus disorder prediction 1054 1077 - -
Viun4g02456 1213 Pfam NB-ARC domain 205 438 IPR002182 GO:0043531
Viun4g02456 1213 PRINTS Disease resistance protein signature 222 237 - -
Viun4g02456 1213 PRINTS Disease resistance protein signature 698 714 - -
Viun4g02456 1213 PRINTS Disease resistance protein signature 297 311 - -
Viun4g02456 1213 PRINTS Disease resistance protein signature 390 404 - -
Viun4g02456 1213 Gene3D Ribonuclease Inhibitor 545 697 IPR032675 -
Viun4g02456 1213 Gene3D Ribonuclease Inhibitor 698 846 IPR032675 -
Viun4g02456 1213 Gene3D - 356 439 IPR042197 -
Viun4g02456 1213 MobiDBLite consensus disorder prediction 1054 1078 - -
Viun4g02456 1213 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 189 - -
Viun4g02456 1213 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Viun4g02456 1213 Pfam TIR domain 20 189 IPR000157 GO:0007165
Viun4g02456 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 449 IPR027417 -
Viun4g02456 1213 Gene3D - 12 186 IPR035897 -
Viun4g02456 1213 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 162 IPR035897 -
Viun4g02456 1213 SMART till_3 19 160 IPR000157 GO:0007165
Viun4g02456 1213 Gene3D - 187 352 IPR027417 -
Viun4g02456 1213 SUPERFAMILY "Winged helix" DNA-binding domain 426 532 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02456 Viun-Chr4 39641495 39645883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02456 199 835 WRKY Transcription Factor Family AT5G45050 30.029 5.35e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02456 - - vum:124821418 1477.61