Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02436 ATGGTGCCATCCAAAGGGTCTGAAACGGCAAAACCCAAACCGGCTATGCCATGGAAGGCACGCATTTCAATAAGCTTTATTTCTACGATCACCGACGCCGCGCGCCGCTCTAACGGCACCATTAATCGCTGTCTAACCAACCTTCTCGATATCAAGGCCCAAGCCTGCTCCTCCGCCGTTAATGGTGTTACCTCCAAAGATGTCACCATTCACGCCGAAAACAAACTCTGGTTCCGCGTCTTCGCCCCCGCAGTCTCCCCCGCCGCCGGCACTCTCCCCGTCGTCGTCTACTTTCACGGAGGCGGCTTCGCGTTCCTCTCGCCGGACTCCTTCGGCTACGACGCCGTCTGTCGCCGAATCTGCCGCCACGTCCCCGCCGTTGTGCTCTCTGTTAATTACCGCCTCACACCGGAGCACCGGTACCCGTCGCAGTACGACGACGGCCAGAATTTCCTCCACTTCCTTGACGAGAATCGCATGGTACTGCCGGAGAACGCTGATGTGTCAAAATGTTTCCTTGCCGGCGACAGCGCCGGTGCTAACTTAGCTCACAACGTCGCAGTTCGGGTCGGGAAGATGGGAATCCGGGAAAATCTAGTTGAGAATTCGGGGTTTCGGAGAATCCAGGTCCTCGGGTTGGTGACGATCCAGCCATTTTTCGGCGGGGAGGAGCGGACGGAGGCTGAGGTGAAGTTTGAAGGTGCGCCGCTGGTGTCAATGGAGAGGGCCGATTGGATGTGGAAGGCGTTTTTGCCTGACGGATCGGATCGTGATCACGGAGCATGCAACGTGAGTGGGCCGAATTCGGAGGATTTGTCGGGTTTGGATTACCCGGATACCCTTGTGATTGTGGGTGGGTTTGATCCTTTACAAGATTGGCAAAGAAGGTATTACGAGTGGTTAACAAAATCGGGTAAAAAGGCCCAATTGGTTGAATATCCGAAAATGTTTCATGCTTTTTATGTTTTTCCTGACTTGCCTGAGTCTTCTCAAATGATGACACAGATCAAGGATTTCATTAACAAGAAACTCGCCCAATAG 1041 0.5379 MVPSKGSETAKPKPAMPWKARISISFISTITDAARRSNGTINRCLTNLLDIKAQACSSAVNGVTSKDVTIHAENKLWFRVFAPAVSPAAGTLPVVVYFHGGGFAFLSPDSFGYDAVCRRICRHVPAVVLSVNYRLTPEHRYPSQYDDGQNFLHFLDENRMVLPENADVSKCFLAGDSAGANLAHNVAVRVGKMGIRENLVENSGFRRIQVLGLVTIQPFFGGEERTEAEVKFEGAPLVSMERADWMWKAFLPDGSDRDHGACNVSGPNSEDLSGLDYPDTLVIVGGFDPLQDWQRRYYEWLTKSGKKAQLVEYPKMFHAFYVFPDLPESSQMMTQIKDFINKKLAQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02436 346 Gene3D alpha/beta hydrolase 4 346 IPR029058 -
Viun4g02436 346 PANTHER ARYLACETAMIDE DEACETYLASE 43 328 - -
Viun4g02436 346 SUPERFAMILY alpha/beta-Hydrolases 53 343 IPR029058 -
Viun4g02436 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 95 111 IPR002168 GO:0016787
Viun4g02436 346 Pfam alpha/beta hydrolase fold 95 321 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02436 Viun-Chr4 39513493 39514796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02436 1 343 Carbohydrate Esterase AT3G05120 37.255 1.55e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02436 - - gmx:102665243 523.857