Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02425 ATGGCTAATTTGCTGTTTTTTGCTGTGGAAATGATAGTGGTGAGTGGTTTCAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTCTTGAGTTGCCCTTTGGCTGAACTTATTGTTAAGAACACAGTCAACAGAGCTCTGCAGAATGATCCCACTCTAGCAGCAGGGCTTCTTAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGTTCAGTTCTGATCGACTCTAATGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGGGGATATGAAGTAATAGATGATATCAAGGAAGCGCTTGAAAAACAATGCCCAGGAGTGGTTTCATGTGCTGACATTCTTGCAATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGGAAGGACGGAAGAAGGTCAAAAATTGAGGATACCATAAATCTTCCGGCACCCATTTTCAATGCTTCTCAGCTCATCAAGGTGTTTGGGCAACATGGGTTTTCTGCAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCGTTCAAGCAGAGACTTACCCCAGTGGATCCATCTTTGGACTCGCAATTTGCGAAGACGCTCTCCAAGACATGCAGTGGTGGTGACAATGCAGAGCAACCCTTTGACTCCACCAGGAACGATTTCGATAACCTATACTTCAATGCTCTGGTTTCAAACAACGGTGTTCTCGCATCAGATCAAACGTTGTACACTACCCCACAAACCAGGAACATTGTGAACTCTTATGCAATGAACCAAGCTTTGTTCTTCTTGGATTTTCAGCAGGCAATGGTGAAGATGAGCACGCTCGATGTCAAAGAAGGTTCCAAAGGGGAAGTGCGAAAAAATTGCCGTAAAATAAACTGA 936 0.4434 MANLLFFAVEMIVVSGFSLGASGLNMNYYFLSCPLAELIVKNTVNRALQNDPTLAAGLLRMHFHDCFIEGCDGSVLIDSNDNTAEKDSPANLSLRGYEVIDDIKEALEKQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIEDTINLPAPIFNASQLIKVFGQHGFSAKDMVALSGAHTLGVARCSSFKQRLTPVDPSLDSQFAKTLSKTCSGGDNAEQPFDSTRNDFDNLYFNALVSNNGVLASDQTLYTTPQTRNIVNSYAMNQALFFLDFQQAMVKMSTLDVKEGSKGEVRKNCRKIN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02425 311 ProSiteProfiles Plant heme peroxidase family profile. 23 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PANTHER - 4 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 SUPERFAMILY Heme-dependent peroxidases 23 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 Gene3D Peroxidase, domain 2 158 290 - -
Viun4g02425 311 FunFam Peroxidase 27 165 - -
Viun4g02425 311 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Viun4g02425 311 CDD secretory_peroxidase 23 310 IPR033905 GO:0004601|GO:0042744
Viun4g02425 311 Gene3D - 27 311 - -
Viun4g02425 311 FunFam Peroxidase 158 290 - -
Viun4g02425 311 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 Pfam Peroxidase 40 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02425 311 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02425 Viun-Chr4 39446562 39448326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02425 2 311 Peroxidase AT4G33420 73.955 2.44e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02425 K00430 - gmx:100809245 546.584